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* deeptools: init at 3.3.1scalavision2019-11-04
* star: 2.7.2b -> 2.7.3aR. RyanTM2019-11-03
* EZminc: 2017-08-29 -> 2019-07-25; mark unbrokenBen Darwin2019-10-26
* truvari: init at 1.3.2 (#70877)scalavision2019-10-24
* picard-tools: 2.20.8 -> 2.21.1 (#71748)R. RyanTM2019-10-23
* dcm2niix: 1.0.20190410 -> 1.0.20190902R. RyanTM2019-10-22
* Merge pull request #69961 from r-ryantm/auto-update/starRenaud2019-10-13
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| * star: 2.7.1a -> 2.7.2bR. RyanTM2019-09-28
* | delly: init at 0.8.1 (#70871)scalavision2019-10-10
* | treewide: mark some broken packages as brokenLinus Heckemann2019-10-08
* | SPAdes: init at 3.13.1 (#63082)Bruno Bzeznik2019-10-03
* | Merge pull request #69735 from r-ryantm/auto-update/picard-toolsRyan Mulligan2019-09-29
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| * | picard-tools: 2.20.5 -> 2.20.8R. RyanTM2019-09-27
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* | Merge pull request #63117 from bzizou/macseAaron Andersen2019-09-27
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| * macse: init at 2.03Bruno Bzeznik2019-09-24
* | maintainer: mimadrid: update github username and personal dataMiguel Madrid Mencía2019-09-14
* | ants: use itk 4.xLinus Heckemann2019-09-13
* | treewide: remove redundant quotesvolth2019-09-08
* | Merge remote-tracking branch 'upstream/gcc-8' into staging-nextFrederik Rietdijk2019-09-08
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| * \ Merge remote-tracking branch 'origin/master' into gcc-8Franz Pletz2019-09-03
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| * \ \ Merge remote-tracking branch 'upstream/master' into gcc-8Robin Gloster2019-08-25
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| * | | | ants: fix build with gcc8Franz Pletz2019-06-17
* | | | | Merge master into staging-nextFrederik Rietdijk2019-09-06
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| * | | | | bedtools: 2.28.0 -> 2.29.0Justin Bedo2019-09-06
* | | | | | Merge branch 'master' into staging-nextJan Tojnar2019-09-06
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| * | | | | xenomapper: init 1.0.2Justin Bedo2019-09-05
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* | | | | Merge branch 'master' into stagingVladimír Čunát2019-09-02
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| * | | | kallisto: 0.43.1 -> 0.46.0Tadeo Kondrak2019-08-31
* | | | | Merge staging-next into stagingFrederik Rietdijk2019-08-31
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| * | | | Merge master into staging-nextFrederik Rietdijk2019-08-31
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| | * \ \ \ Merge pull request #63127 from bzizou/trimalLassulus2019-08-31
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| | | * | | | trimal: init at 1.4.1Bruno Bzeznik2019-06-14
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* | | | | | Merge staging-next into stagingFrederik Rietdijk2019-08-31
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| * | | | | Merge master into staging-nextFrederik Rietdijk2019-08-31
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| | * | | | Merge pull request #64669 from luispedro/add_sortmernaLéo Gaspard2019-08-27
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| | | * | | sortmerna: init at 3.0.3Luis Pedro Coelho2019-08-27
* | | | | | treewide: remove redundant recvolth2019-08-28
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* | | | | Merge branch 'master' into staging-nextVladimír Čunát2019-08-24
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| * | | | picard-tools: 2.20.4 -> 2.20.5R. RyanTM2019-08-19
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* / / / treewide: name -> pname (easy cases) (#66585)volth2019-08-15
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* | | picard-tools: 2.20.3 -> 2.20.4R. RyanTM2019-08-04
* | | Merge pull request #63282 from jbedo/strelkaRobin Gloster2019-08-01
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| * | | strelka: 2.9.5 -> 2.9.10Justin Bedo2019-06-17
* | | | Merge pull request #64897 from bzizou/est-sfslewo2019-07-22
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| * | | | est-sfs: init at 2.03Bruno Bzeznik2019-07-16
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* | | | bedtools: 2.27.1 -> 2.28.0Justin Bedo2019-07-20
* | | | stacks: 2.4 -> 2.41R. RyanTM2019-07-17
* | | | Merge pull request #64862 from r-ryantm/auto-update/picard-toolsRyan Mulligan2019-07-16
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| * | | | picard-tools: 2.20.2 -> 2.20.3R. RyanTM2019-07-15
* | | | | Merge pull request #64324 from jbedo/hisat2worldofpeace2019-07-13
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