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author | Frederik Rietdijk <fridh@fridh.nl> | 2019-08-31 18:07:33 +0200 |
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committer | Frederik Rietdijk <fridh@fridh.nl> | 2019-08-31 18:07:33 +0200 |
commit | 98ef78326d4349a14e328b322495e34242d796cc (patch) | |
tree | 1582a9a7d560d91b7125a4b5a4c49dab62a0479d /pkgs/applications/science/biology | |
parent | 92b96ce63fa8752d0487edbe026a37ff765b33b3 (diff) | |
parent | 96e5474329a3c2b2309872fb01b007daaf6d7bdc (diff) | |
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Merge staging-next into staging
Diffstat (limited to 'pkgs/applications/science/biology')
-rwxr-xr-x | pkgs/applications/science/biology/trimal/default.nix | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/trimal/default.nix b/pkgs/applications/science/biology/trimal/default.nix new file mode 100755 index 000000000000..d4e8fee7bc36 --- /dev/null +++ b/pkgs/applications/science/biology/trimal/default.nix @@ -0,0 +1,31 @@ +{ stdenv, fetchFromGitHub }: + +stdenv.mkDerivation rec { + pname = "trimal"; + version = "1.4.1"; + + src = fetchFromGitHub { + repo = pname; + owner = "scapella"; + rev = "v${version}"; + sha256 = "0isc7s3514di4z953xq53ncjkbi650sh4q9yyw5aag1n9hqnh7k0"; + }; + + postUnpack = '' + sourceRoot=''${sourceRoot}/source + echo Source root reset to ''${sourceRoot} + ''; + + installPhase = '' + mkdir -p $out/bin + cp -a trimal readal statal $out/bin + ''; + + meta = with stdenv.lib; { + description = "A tool for the automated removal of spurious sequences or poorly aligned regions from a multiple sequence alignment"; + license = licenses.gpl3; + platforms = platforms.linux; + homepage = http://trimal.cgenomics.org; + maintainers = [ maintainers.bzizou ]; + }; +} |