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Diffstat (limited to 'pkgs/applications/science/biology')
| -rw-r--r-- | pkgs/applications/science/biology/svaba/default.nix | 7 |
1 files changed, 7 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/svaba/default.nix b/pkgs/applications/science/biology/svaba/default.nix index 441c7ed6dcc3..d36c4b668ec3 100644 --- a/pkgs/applications/science/biology/svaba/default.nix +++ b/pkgs/applications/science/biology/svaba/default.nix @@ -14,6 +14,13 @@ stdenv.mkDerivation rec { buildInputs = [ zlib bzip2 xz ]; + postPatch = '' + # Fix gcc-13 build failure due to missing includes + sed -e '1i #include <cstdint>' -i \ + SeqLib/src/non_api/Histogram.h \ + src/svaba/Histogram.h + ''; + # Workaround build failure on -fno-common toolchains like upstream # gcc-10. Otherwise build fails as: # ld: ./libfml.a(rle.o):/build/source/SeqLib/fermi-lite/rle.h:33: multiple definition of |