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authorBen Darwin <bcdarwin@gmail.com>2017-03-19 18:54:37 -0400
committerBen Darwin <bcdarwin@gmail.com>2017-03-22 16:01:05 -0400
commitfbc9a4d7dce249963797d82a788ee9f2acaa21cf (patch)
treedc237bc92005ef5b2dc29db5c2cb98172faf09c9 /pkgs/applications/science/biology
parentf02ac9588ffa4d1a68764be378f4bc3a5ab94ecd (diff)
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ants: set $ANTSPATH variable in shell scripts
Diffstat (limited to 'pkgs/applications/science/biology')
-rw-r--r--pkgs/applications/science/biology/ants/default.nix10
1 files changed, 8 insertions, 2 deletions
diff --git a/pkgs/applications/science/biology/ants/default.nix b/pkgs/applications/science/biology/ants/default.nix
index fa40e53aa0a5..24ab2ee9ac5e 100644
--- a/pkgs/applications/science/biology/ants/default.nix
+++ b/pkgs/applications/science/biology/ants/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, cmake, itk, vtk }:
+{ stdenv, fetchFromGitHub, cmake, makeWrapper, itk, vtk }:
 
 stdenv.mkDerivation rec {
   _name    = "ANTs";
@@ -12,7 +12,7 @@ stdenv.mkDerivation rec {
     sha256 = "0gyys1lf69bl3569cskxc8r5llwcr0dsyzvlby5skhfpsyw0dh8r";
   };
 
-  nativeBuildInputs = [ cmake ];
+  nativeBuildInputs = [ cmake makeWrapper ];
   buildInputs = [ itk vtk ];
 
   cmakeFlags = [ "-DANTS_SUPERBUILD=FALSE" "-DUSE_VTK=TRUE" ];
@@ -20,6 +20,12 @@ stdenv.mkDerivation rec {
   checkPhase = "ctest";
   doCheck = false;
 
+  postInstall = ''
+    for file in $out/bin/*; do
+      wrapProgram $file --set ANTSPATH "$out/bin"
+    done
+  '';
+
   meta = with stdenv.lib; {
     homepage = https://github.com/stnava/ANTs;
     description = "Advanced normalization toolkit for medical image registration and other processing";