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authorsuperherointj <5861043+superherointj@users.noreply.github.com>2024-01-20 13:36:41 -0300
committersuperherointj <5861043+superherointj@users.noreply.github.com>2024-01-20 15:28:48 -0300
commit41ad0e477d7ed96affdea49f6224034eda281296 (patch)
treebc31d38c87ebba998a3507073f591fe0b1782af6 /pkgs/applications/science/biology
parentf1557a2d2c2c3cb59b6cdb5ff36b60be19a8832c (diff)
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SPAdes: fix build
Fixes #282372

Co-authored-by: @wegank
Diffstat (limited to 'pkgs/applications/science/biology')
-rw-r--r--pkgs/applications/science/biology/spades/default.nix5
1 files changed, 5 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/spades/default.nix b/pkgs/applications/science/biology/spades/default.nix
index 976dd65ef223..0b0491a71aae 100644
--- a/pkgs/applications/science/biology/spades/default.nix
+++ b/pkgs/applications/science/biology/spades/default.nix
@@ -17,6 +17,11 @@ stdenv.mkDerivation rec {
 
   sourceRoot = "${pname}-${version}/src";
 
+  env.CXXFLAGS = toString [
+    # GCC 13: error: 'uint32_t' does not name a type
+    "-include cstdint"
+  ];
+
   meta = with lib; {
     description = "St. Petersburg genome assembler: assembly toolkit containing various assembly pipelines";
     license = licenses.gpl2Only;