From 41ad0e477d7ed96affdea49f6224034eda281296 Mon Sep 17 00:00:00 2001
From: superherointj <5861043+superherointj@users.noreply.github.com>
Date: Sat, 20 Jan 2024 13:36:41 -0300
Subject: SPAdes: fix build

Fixes #282372

Co-authored-by: @wegank
---
 pkgs/applications/science/biology/spades/default.nix | 5 +++++
 1 file changed, 5 insertions(+)

(limited to 'pkgs/applications/science/biology')

diff --git a/pkgs/applications/science/biology/spades/default.nix b/pkgs/applications/science/biology/spades/default.nix
index 976dd65ef223..0b0491a71aae 100644
--- a/pkgs/applications/science/biology/spades/default.nix
+++ b/pkgs/applications/science/biology/spades/default.nix
@@ -17,6 +17,11 @@ stdenv.mkDerivation rec {
 
   sourceRoot = "${pname}-${version}/src";
 
+  env.CXXFLAGS = toString [
+    # GCC 13: error: 'uint32_t' does not name a type
+    "-include cstdint"
+  ];
+
   meta = with lib; {
     description = "St. Petersburg genome assembler: assembly toolkit containing various assembly pipelines";
     license = licenses.gpl2Only;
-- 
cgit 1.4.1