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a :
let
fetchurl = a.fetchurl;
version = "20090809";
buildInputs = with a; [
tcsh libX11 libXaw lesstif xproto mesa libXt
libSM libICE libXmu libXext
];
in
rec {
src = fetchurl {
url = "ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/old/${version}/ncbi.tar.gz";
sha256 = "05bbnqk6ffvhi556fsabcippzq2zrkynbk09qblzvfzip9hlk1qc";
};
inherit buildInputs;
configureFlags = [];
/* doConfigure should be removed if not needed */
phaseNames = ["preBuild" "build" "deploy"];
preBuild = a.fullDepEntry (''
sed -e 's@#!/bin/csh@#! ${a.tcsh}/bin/csh@' -i $(fgrep '#!/bin/csh' -rl build make)
sed -e '/set path/d' -i make/ln-if-absent
sed -e 's@/usr/include @${a.lesstif}/include ${a.mesa}/include @' -i make/makedis.csh
sed -e 's@/usr/[a-zA-Z0-9]*/include @@g; s@/usr/include/[a-zA-Z0-9/] @@g' -i make/makedis.csh
cd ..
'') ["doUnpack" "minInit"];
build = a.fullDepEntry (''
./ncbi/make/makedis.csh
'') ["preBuild" "addInputs"];
deploy = a.fullDepEntry (''
mkdir -p $out/bin $out/lib $out/include $out/source $out/share/${name}/build-snapshot
cd ncbi/build
cp *.o *.so $out/lib
cp -r . $out/share/${name}/build-snapshot
cp ../make/makedis.csh $out/share/${name}/build-snapshot
cp *.h $out/include
cp *.c *.h $out/source
find . -perm +111 -a '(' '(' ! -name '*.*' ')' -o '(' -name '*.REAL' ')' ')' -exec cp '{}' $out/bin ';'
'') ["defEnsureDir" "build" "minInit"];
name = "NCBI-Toolbox-" + version;
meta = {
description = "NCBI general-purpose portable toolkit";
maintainers = [
a.lib.maintainers.raskin
];
#platforms = a.lib.platforms.linux ;
};
}
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