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{ stdenv, fetchurl, bzip2, gfortran, libX11, libXmu, libXt
, libjpeg, libpng, libtiff, ncurses, pango, pcre, perl, readline, tcl
, texLive, tk, xz, zlib, less, texinfo, graphviz, icu, pkgconfig, bison
, imake, which, jdk, openblas, curl
, withRecommendedPackages ? true
}:
stdenv.mkDerivation rec {
name = "R-3.2.2";
src = fetchurl {
url = "http://cran.r-project.org/src/base/R-3/${name}.tar.gz";
sha256 = "07a6s865bjnh7w0fqsrkv1pva76w99v86w0w787qpdil87km54cw";
};
buildInputs = [ bzip2 gfortran libX11 libXmu libXt
libXt libjpeg libpng libtiff ncurses pango pcre perl readline tcl
texLive tk xz zlib less texinfo graphviz icu pkgconfig bison imake
which jdk openblas curl
];
patches = [ ./no-usr-local-search-paths.patch
./fix-tests-without-recommended-packages.patch ];
preConfigure = ''
configureFlagsArray=(
--disable-lto
--with${stdenv.lib.optionalString (!withRecommendedPackages) "out"}-recommended-packages
--with-blas="-L${openblas}/lib -lopenblas"
--with-lapack="-L${openblas}/lib -lopenblas"
--with-readline
--with-tcltk --with-tcl-config="${tcl}/lib/tclConfig.sh" --with-tk-config="${tk}/lib/tkConfig.sh"
--with-cairo
--with-libpng
--with-jpeglib
--with-libtiff
--with-system-zlib
--with-system-bzlib
--with-system-pcre
--with-system-xz
--with-ICU
--enable-R-shlib
AR=$(type -p ar)
AWK=$(type -p gawk)
CC=$(type -p gcc)
CXX=$(type -p g++)
FC="${gfortran}/bin/gfortran" F77="${gfortran}/bin/gfortran"
JAVA_HOME="${jdk}"
LDFLAGS="-L${gfortran.cc}/lib"
RANLIB=$(type -p ranlib)
R_SHELL="${stdenv.shell}"
)
echo "TCLLIBPATH=${tk}/lib" >>etc/Renviron.in
'';
installTargets = [ "install" "install-info" "install-pdf" ];
doCheck = true;
enableParallelBuilding = true;
setupHook = ./setup-hook.sh;
meta = {
homepage = "http://www.r-project.org/";
description = "Free software environment for statistical computing and graphics";
license = stdenv.lib.licenses.gpl2Plus;
longDescription = ''
GNU R is a language and environment for statistical computing and
graphics that provides a wide variety of statistical (linear and
nonlinear modelling, classical statistical tests, time-series
analysis, classification, clustering, ...) and graphical
techniques, and is highly extensible. One of R's strengths is the
ease with which well-designed publication-quality plots can be
produced, including mathematical symbols and formulae where
needed. R is an integrated suite of software facilities for data
manipulation, calculation and graphical display. It includes an
effective data handling and storage facility, a suite of operators
for calculations on arrays, in particular matrices, a large,
coherent, integrated collection of intermediate tools for data
analysis, graphical facilities for data analysis and display
either on-screen or on hardcopy, and a well-developed, simple and
effective programming language which includes conditionals, loops,
user-defined recursive functions and input and output facilities.
'';
platforms = stdenv.lib.platforms.all;
hydraPlatforms = stdenv.lib.platforms.linux;
maintainers = [ stdenv.lib.maintainers.simons ];
};
}
|