blob: b9abe2bb768282e9f78f70cfa357330ec57266b3 (
plain) (
blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
|
{ lib
, buildPythonPackage
, fetchFromGitHub
, nose
, numpy
, scikitlearn
, scipy
, numba
, pynndescent
, tensorflow
, pytestCheckHook
}:
buildPythonPackage rec {
pname = "umap-learn";
version = "0.5.0";
src = fetchFromGitHub {
owner = "lmcinnes";
repo = "umap";
rev = version;
sha256 = "sha256-2Z5RDi4bz8hh8zMwkcCQY9NrGaVd1DJEBOmrCl2oSvM=";
};
checkInputs = [
nose
tensorflow
pytestCheckHook
];
propagatedBuildInputs = [
numpy
scikitlearn
scipy
numba
pynndescent
];
preCheck = ''
export HOME=$TMPDIR
'';
disabledTests = [
# Plot functionality requires additional packages.
# These test also fail with 'RuntimeError: cannot cache function' error.
"test_umap_plot_testability"
"test_plot_runs_at_all"
# Flaky test. Fails with AssertionError sometimes.
"test_sparse_hellinger"
];
meta = with lib; {
description = "Uniform Manifold Approximation and Projection";
homepage = "https://github.com/lmcinnes/umap";
license = licenses.bsd3;
maintainers = [ maintainers.costrouc ];
};
}
|