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{ lib
, buildPythonPackage
, dask
, fetchPypi
, fsspec
, lxml
, numpy
, pytestCheckHook
, pythonOlder
, zarr
}:
buildPythonPackage rec {
pname = "tifffile";
version = "2024.2.12";
format = "setuptools";
disabled = pythonOlder "3.9";
src = fetchPypi {
inherit pname version;
hash = "sha256-SSCj7I6OAD5nPTxlMYY8me7dVw0bi34UHAcu14/4Aw0=";
};
propagatedBuildInputs = [
numpy
];
nativeCheckInputs = [
dask
fsspec
lxml
pytestCheckHook
zarr
];
disabledTests = [
# Test require network access
"test_class_omexml"
"test_write_ome"
# Test file is missing
"test_write_predictor"
"test_issue_imagej_hyperstack_arg"
"test_issue_description_overwrite"
# AssertionError
"test_write_bigtiff"
"test_write_imagej_raw"
# https://github.com/cgohlke/tifffile/issues/142
"test_func_bitorder_decode"
# Test file is missing
"test_issue_invalid_predictor"
];
pythonImportsCheck = [
"tifffile"
];
# flaky, often killed due to OOM or timeout
env.SKIP_LARGE = "1";
meta = with lib; {
description = "Read and write image data from and to TIFF files";
homepage = "https://github.com/cgohlke/tifffile/";
changelog = "https://github.com/cgohlke/tifffile/blob/v${version}/CHANGES.rst";
license = licenses.bsd3;
maintainers = with maintainers; [ lebastr ];
};
}
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