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{ lib
, fetchPypi
, buildPythonPackage
, pythonOlder
, setuptools-scm
, pytestCheckHook
}:
buildPythonPackage rec {
pname = "screed";
version = "1.1.3";
format = "setuptools";
disabled = pythonOlder "3.8";
src = fetchPypi {
inherit pname version;
hash = "sha256-N+gWl8fbqVoFNVTltahq/zKXBeHPXfxee42lht7gcrg=";
};
nativeBuildInputs = [ setuptools-scm ];
pythonImportsCheck = [ "screed" ];
checkInputs = [ pytestCheckHook ];
# These tests use the screed CLI and make assumptions on how screed is
# installed that break with nix. Can be enabled when upstream is fixed.
disabledTests = [
"Test_convert_shell"
"Test_fa_shell_command"
"Test_fq_shell_command"
];
meta = with lib; {
description = "A simple read-only sequence database, designed for short reads";
mainProgram = "screed";
homepage = "https://pypi.org/project/screed/";
maintainers = with maintainers; [ luizirber ];
license = licenses.bsd3;
};
}
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