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{ lib
, buildPythonPackage
, fetchFromGitHub
, fetchpatch
, pytestCheckHook
, writeText
, autograd
, cma
, cython
, deprecated
, dill
, matplotlib
, nbformat
, notebook
, numba
, numpy
, pandas
, scipy
}:
buildPythonPackage rec {
pname = "pymoo";
version = "0.6.0.1";
format = "setuptools";
src = fetchFromGitHub {
owner = "anyoptimization";
repo = "pymoo";
rev = version;
hash = "sha256-+qtW7hfSo266n1SRzAgHIu99W5Sl+NYbKOHXv/JI9IA=";
};
pymoo_data = fetchFromGitHub {
owner = "anyoptimization";
repo = "pymoo-data";
rev = "33f61a78182ceb211b95381dd6d3edee0d2fc0f3";
hash = "sha256-iGWPepZw3kJzw5HKV09CvemVvkvFQ38GVP+BAryBSs0=";
};
patches = [
# https://github.com/anyoptimization/pymoo/pull/407
(fetchpatch {
url = "https://github.com/anyoptimization/pymoo/commit/be57ece64275469daece1e8ef12b2b6ee05362c9.diff";
hash = "sha256-BLPrUqNbAsAecfYahESEJF6LD+kehUYmkTvl/nvyqII=";
})
];
postPatch = ''
substituteInPlace setup.py \
--replace "cma==3.2.2" "cma" \
--replace "'alive-progress'," ""
substituteInPlace pymoo/util/display/display.py \
--replace "from pymoo.util.display.progress import ProgressBar" "" \
--replace "ProgressBar() if progress else None" \
"print('Missing alive_progress needed for progress=True!') if progress else None"
'';
nativeBuildInputs = [
cython
];
propagatedBuildInputs = [
autograd
cma
deprecated
dill
matplotlib
numpy
scipy
];
doCheck = true;
preCheck = ''
substituteInPlace pymoo/config.py \
--replace "https://raw.githubusercontent.com/anyoptimization/pymoo-data/main/" \
"file://$pymoo_data/"
'';
nativeCheckInputs = [
pytestCheckHook
nbformat
notebook
numba
];
# Select some lightweight tests
pytestFlagsArray = [
"-m 'not long'"
];
disabledTests = [
# ModuleNotFoundError: No module named 'pymoo.cython.non_dominated_sorting'
"test_fast_non_dominated_sorting"
"test_efficient_non_dominated_sort"
];
# Avoid crashing sandboxed build on macOS
MATPLOTLIBRC=writeText "" ''
backend: Agg
'';
pythonImportsCheck = [ "pymoo" ];
meta = with lib; {
description = "Multi-objective Optimization in Python";
homepage = "https://pymoo.org/";
license = licenses.asl20;
maintainers = with maintainers; [ veprbl ];
};
}
|