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{ lib, stdenv
, pythonOlder
, buildPythonPackage
, fetchFromGitHub
, setuptools-scm
, gmt
, numpy
, netcdf4
, pandas
, packaging
, xarray
, pytest-mpl
, ipython
, ghostscript
, pytestCheckHook
}:
buildPythonPackage rec {
pname = "pygmt";
version = "0.5.0";
disabled = pythonOlder "3.6";
src = fetchFromGitHub {
owner = "GenericMappingTools";
repo = "pygmt";
rev = "v${version}";
sha256 = "1mazljxwh162df971cvv7cwnqr300r17qfs7k09s6yd6hajyhz49";
};
postPatch = ''
substituteInPlace pygmt/clib/loading.py \
--replace "env.get(\"GMT_LIBRARY_PATH\", \"\")" "env.get(\"GMT_LIBRARY_PATH\", \"${gmt}/lib\")"
'';
nativeBuildInputs = [ setuptools-scm ];
propagatedBuildInputs = [ numpy netcdf4 pandas packaging xarray ];
doCheck = false; # the *entire* test suite requires network access
checkInputs = [ pytestCheckHook pytest-mpl ghostscript ipython ];
postBuild = ''
export HOME=$TMP
'';
pythonImportsCheck = [ "pygmt" ];
meta = with lib; {
description = "A Python interface for the Generic Mapping Tools";
homepage = "https://github.com/GenericMappingTools/pygmt";
license = licenses.bsd3;
# pygmt.exceptions.GMTCLibNotFoundError: Error loading the GMT shared library '/nix/store/r3xnnqgl89vrnq0kzxx0bmjwzks45mz8-gmt-6.1.1/lib/libgmt.dylib'
broken = stdenv.isDarwin;
maintainers = with maintainers; [ sikmir ];
};
}
|