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{ lib
, buildPythonPackage
, fetchPypi
# build-system
, cython_3
, meson-python
, ninja
, setuptools
# dependencies
, numpy
, scipy
, nibabel
, sympy
, transforms3d
# optional-dependencies
, matplotlib
# tests
, pytestCheckHook
}:
buildPythonPackage rec {
version = "0.6.0";
pname = "nipy";
pyproject = true;
src = fetchPypi {
inherit pname version;
hash = "sha256-BTn2nV4VMeT8bxTOJTHjRU8I2bxFZCzIZCZVn/QcUrk=";
};
postPatch = ''
patchShebangs nipy/_build_utils/cythoner.py
'';
build-system = [
cython_3
meson-python
setuptools
ninja
numpy
];
dependencies = [
nibabel
numpy
scipy
sympy
transforms3d
];
optional-dependencies.optional = [
matplotlib
];
nativeCheckInputs = [
pytestCheckHook
] ++ optional-dependencies.optional;
doCheck = false; # partial imports … circular dependencies. needs more time to figure out.
pythonImportsCheck = [
"nipy"
"nipy.testing"
"nipy.algorithms"
];
meta = with lib; {
homepage = "https://nipy.org/nipy";
description = "Software for structural and functional neuroimaging analysis";
downloadPage = "https://github.com/nipy/nipy";
license = licenses.bsd3;
};
}
|