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{ lib
, buildPythonPackage
, fetchFromGitHub
, setuptools
, setuptools-scm
, numpy
, scipy
, pytestCheckHook
, pytest-timeout
, pytest-harvest
, matplotlib
, decorator
, jinja2
, pooch
, tqdm
, packaging
, importlib-resources
, lazy-loader
, h5io
, pymatreader
, pythonOlder
}:
buildPythonPackage rec {
pname = "mne-python";
version = "1.6.1";
pyproject = true;
disabled = pythonOlder "3.8";
src = fetchFromGitHub {
owner = "mne-tools";
repo = "mne-python";
rev = "refs/tags/v${version}";
hash = "sha256-U1aMqcUZ3BcwqwOYh/qfG5PhacwBVioAgNc52uaoJL0";
};
postPatch = ''
substituteInPlace pyproject.toml \
--replace "--cov-report=" "" \
--replace "--cov-branch" ""
'';
nativeBuildInputs = [
setuptools
setuptools-scm
];
propagatedBuildInputs = [
numpy
scipy
matplotlib
tqdm
pooch
decorator
packaging
jinja2
lazy-loader
] ++ lib.optionals (pythonOlder "3.9") [
importlib-resources
];
passthru.optional-dependencies = {
hdf5 = [
h5io
pymatreader
];
};
nativeCheckInputs = [
pytestCheckHook
pytest-timeout
pytest-harvest
] ++ lib.flatten (builtins.attrValues passthru.optional-dependencies);
preCheck = ''
export HOME=$(mktemp -d)
export MNE_SKIP_TESTING_DATASET_TESTS=true
export MNE_SKIP_NETWORK_TESTS=1
'';
pythonImportsCheck = [
"mne"
];
meta = with lib; {
description = "Magnetoencephelography and electroencephalography in Python";
homepage = "https://mne.tools";
changelog = "https://mne.tools/stable/changes/v${version}.html";
license = licenses.bsd3;
maintainers = with maintainers; [ bcdarwin mbalatsko ];
};
}
|