blob: 5edfd4afc341770cc1b54a8b2da164bba06b429b (
plain) (
blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
|
{ lib
, buildPythonPackage
, fetchFromGitHub
, pythonOlder
, pytestCheckHook
, matplotlib
, pydicom
, python-dateutil
, setuptools
}:
let
deid-data = buildPythonPackage rec {
pname = "deid-data";
version = "unstable-2022-12-06";
format = "pyproject";
disabled = pythonOlder "3.7";
nativeBuildInputs = [ setuptools ];
propagatedBuildInputs = [ pydicom ];
src = fetchFromGitHub {
owner = "pydicom";
repo = "deid-data";
rev = "5750d25a5048fba429b857c16bf48b0139759644";
hash = "sha256-c8NBAN53NyF9dPB7txqYtM0ac0Y+Ch06fMA1LrIUkbc=";
};
meta = {
description = "Supplementary data for deid package";
homepage = "https://github.com/pydicom/deid-data";
license = lib.licenses.mit;
maintainers = [ lib.maintainers.bcdarwin ];
};
};
in
buildPythonPackage rec {
pname = "deid";
version = "0.3.22";
format = "pyproject";
disabled = pythonOlder "3.7";
# Pypi version has no tests
src = fetchFromGitHub {
owner = "pydicom";
repo = pname;
# the github repo does not contain Pypi version tags:
rev = "40dc96125daeb65856d643e12c3d6dfec756be0d";
hash = "sha256-OtxQPF29eqt8I1Q12ga8a1IjBVO+VBk6y0DQmRtCNoU=";
};
propagatedBuildInputs = [
matplotlib
pydicom
python-dateutil
];
nativeCheckInputs = [
deid-data
pytestCheckHook
];
pythonImportsCheck = [
"deid"
];
meta = with lib; {
description = "Best-effort anonymization for medical images";
mainProgram = "deid";
homepage = "https://pydicom.github.io/deid";
license = licenses.mit;
maintainers = with maintainers; [ bcdarwin ];
};
}
|