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{ lib
, stdenv
, fetchFromGitHub
, cmake
, python3
, boost
, eigen
, libGLU
, fltk
, itk
, vtk
, zlib
, tbb
}:
stdenv.mkDerivation rec {
pname = "mirtk";
version = "unstable-2022-07-22";
src = fetchFromGitHub {
owner = "BioMedIA";
repo = "MIRTK";
rev = "973ce2fe3f9508dec68892dbf97cca39067aa3d6";
hash = "sha256-vKgkDrbyGOcbaYlxys1duC8ZNG0Y2nqh3TtSQ06Ox0Q=";
fetchSubmodules = true;
};
cmakeFlags = [
"-DWITH_VTK=ON"
"-DBUILD_ALL_MODULES=ON"
"-DWITH_TBB=ON"
"-DWITH_ITK=ON"
"-DWITH_GIFTICLIB=ON"
"-DWITH_NIFTILIB=ON"
];
# tries to download data during configuration
postPatch = ''
substituteInPlace Packages/DrawEM/CMakeLists.txt --replace "include(Atlases.cmake)" ""
'';
# tests don't seem to be maintained and gtest fails to link with BUILD_TESTING=ON;
# unclear if specific to Nixpkgs
doCheck = false;
postInstall = ''
install -Dm644 -t "$out/share/bash-completion/completions/mirtk" share/completion/bash/mirtk
'';
env.NIX_CFLAGS_COMPILE = "-Wno-changes-meaning";
nativeBuildInputs = [ cmake ];
buildInputs = [
boost
eigen
fltk
itk
libGLU.dev
python3
tbb
vtk
zlib
];
meta = with lib; {
homepage = "https://github.com/BioMedIA/MIRTK";
description = "Medical image registration library and tools";
mainProgram = "mirtk";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.linux;
license = licenses.asl20;
};
}
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