blob: 711097757220b95628696c474fe42abb116829fb (
plain) (
blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
|
{ lib, stdenv
, fetchpatch
, fetchurl
, hdf5
, m4
, curl # for DAP
, removeReferencesTo
}:
let
inherit (hdf5) mpiSupport mpi;
in stdenv.mkDerivation rec {
pname = "netcdf";
version = "4.8.0"; # Remove patch mentioned below on upgrade
src = fetchurl {
url = "https://www.unidata.ucar.edu/downloads/netcdf/ftp/${pname}-c-${version}.tar.gz";
sha256 = "1mfn8qi4k0b8pyar3wa8v0npj69c7rhgfdlppdwmq5jqk88kb5k7";
};
patches = [
# Fixes:
# *** Checking vlen of compound file...Sorry! Unexpected result, tst_h_atts3.c, line: 289
# FAIL tst_h_atts3 (exit status: 2)
# TODO: Remove with next netcdf release (see https://github.com/Unidata/netcdf-c/pull/1980)
(fetchpatch {
name = "netcdf-Fix-tst_h_atts3-for-hdf5-1.12.patch";
url = "https://github.com/Unidata/netcdf-c/commit/9fc8ae62a8564e095ff17f4612874581db0e4db5.patch";
sha256 = "128kxz5jikq32x5qjmi0xdngi0k336rf6bvbcppvlk5gibg5nk7v";
})
];
postPatch = ''
patchShebangs .
# this test requires the net
for a in ncdap_test/Makefile.am ncdap_test/Makefile.in; do
substituteInPlace $a --replace testurl.sh " "
done
'';
nativeBuildInputs = [ m4 removeReferencesTo ];
buildInputs = [ hdf5 curl mpi ];
passthru = {
inherit mpiSupport mpi;
};
configureFlags = [
"--enable-netcdf-4"
"--enable-dap"
"--enable-shared"
"--disable-dap-remote-tests"
]
++ (lib.optionals mpiSupport [ "--enable-parallel-tests" "CC=${mpi}/bin/mpicc" ]);
disallowedReferences = [ stdenv.cc ];
postFixup = ''
remove-references-to -t ${stdenv.cc} "$(readlink -f $out/lib/libnetcdf.settings)"
'';
doCheck = !mpiSupport;
meta = {
description = "Libraries for the Unidata network Common Data Format";
platforms = lib.platforms.unix;
homepage = "https://www.unidata.ucar.edu/software/netcdf/";
license = {
url = "https://www.unidata.ucar.edu/software/netcdf/docs/copyright.html";
};
};
}
|