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{ lib
, stdenv
, fetchFromGitHub
, cmake
, llvmPackages
}:
stdenv.mkDerivation (finalAttrs: {
pname = "veryfasttree";
version = "4.0.3";
src = fetchFromGitHub {
owner = "citiususc";
repo = "veryfasttree";
rev = "v${finalAttrs.version}";
hash = "sha256-Sp331VJRaYv/BTwFj3HwUcUsWjYf6YEXWjYdOzDhBBA=";
};
nativeBuildInputs = [ cmake ];
buildInputs = lib.optional stdenv.cc.isClang llvmPackages.openmp;
installPhase = ''
runHook preInstall
install -m755 -D VeryFastTree $out/bin/VeryFastTree
runHook postInstall
'';
meta = {
description = "Speeding up the estimation of phylogenetic trees for large alignments through parallelization and vectorization strategies";
homepage = "https://github.com/citiususc/veryfasttree";
license = lib.licenses.gpl3Plus;
maintainers = with lib.maintainers; [ thyol ];
platforms = lib.platforms.all;
};
})
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