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{ stdenv, fetchFromGitHub, zlib }:
stdenv.mkDerivation rec {
name = "star-${version}";
version = "2.7.0f";
src = fetchFromGitHub {
repo = "STAR";
owner = "alexdobin";
rev = version;
sha256 = "0ndqlyimf7xf00nghn8awg12pw985ixghiypg98r2gdm7pscgd0i";
};
sourceRoot = "source/source";
postPatch = "sed 's:/bin/rm:rm:g' -i Makefile";
buildInputs = [ zlib ];
buildPhase = "make STAR STARlong";
installPhase = ''
mkdir -p $out/bin
cp STAR STARlong $out/bin
'';
meta = with stdenv.lib; {
description = "Spliced Transcripts Alignment to a Reference";
homepage = https://github.com/alexdobin/STAR;
license = licenses.gpl3Plus;
platforms = platforms.linux;
maintainers = [ maintainers.arcadio ];
};
}
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