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{ lib, fetchurl, appimageTools, wrapGAppsHook }:
let
pname = "jbrowse";
version = "2.5.0";
src = fetchurl {
url = "https://github.com/GMOD/jbrowse-components/releases/download/v${version}/jbrowse-desktop-v${version}-linux.AppImage";
sha256 = "sha256-YLsyA+RVoFvjE4MfAtglJYdUgic487SxwdUhvolzBPc=";
};
appimageContents = appimageTools.extractType2 {
inherit pname version src;
};
in
appimageTools.wrapType2 {
inherit pname version src;
unshareIpc = false;
extraInstallCommands = ''
mkdir -p $out/bin
mv $out/bin/jbrowse-${version} $out/bin/jbrowse-desktop
install -m 444 -D ${appimageContents}/jbrowse-desktop.desktop $out/share/applications/jbrowse-desktop.desktop
install -m 444 -D ${appimageContents}/jbrowse-desktop.png \
$out/share/icons/hicolor/512x512/apps/jbrowse-desktop.png
substituteInPlace $out/share/applications/jbrowse-desktop.desktop \
--replace 'Exec=AppRun --no-sandbox' 'Exec=jbrowse-desktop'
'';
meta = with lib; {
description = "The next-generation genome browser";
mainProgram = "jbrowse-desktop";
homepage = "https://jbrowse.org/jb2/";
license = licenses.asl20;
maintainers = with maintainers; [ benwbooth ];
platforms = [ "x86_64-linux" ];
};
}
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