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{ lib, stdenv, fetchFromGitHub, cmake, tbb, zlib, python3, perl }:
stdenv.mkDerivation rec {
pname = "bowtie2";
version = "2.5.1";
src = fetchFromGitHub {
owner = "BenLangmead";
repo = pname;
rev = "v${version}";
sha256 = "sha256-HaiZmWU6akHXJVWBmCvkG2E61NDrAP7UIxx9DNCEZqE=";
};
nativeBuildInputs = [ cmake ];
buildInputs = [ tbb zlib python3 perl ];
meta = with lib; {
description = "An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences";
license = licenses.gpl3;
homepage = "http://bowtie-bio.sf.net/bowtie2";
maintainers = with maintainers; [ rybern ];
platforms = platforms.all;
broken = stdenv.isAarch64; # only x86 is supported
};
}
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