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* gtkwave: 3.3.103 -> 3.3.104R. RyanTM2020-02-24
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* Merge pull request #80292 from bcdarwin/mrtrixLinus Heckemann2020-02-24
|\ | | | | mrtrix: init at 3.0_RC3_latest
| * mrtrix: init at 3.0_RC3_latestBen Darwin2020-02-16
| | | | | | | | | | | | This package consists mostly of command-line tools, but there are also two qt5-based image viewers (`mrview` and `shview`). I have provided an option `withGui = true` to allow users to disable these viewers. They work on NixOS but unlikely to work out-of-the box on non-NixOS Linux (see #62169), but I've refrained from asserting that they shouldn't be built since a user might want to fiddle with runtime GL stuff. Some programs rely on FSL and/or ANTs backends; I have somewhat heavy-handedly wrapped all binaries to point to ANTs, while FSL is not available in Nix at the moment and has a non-commercial license so would be convenient to disable by default for Hydra builds.
* | Merge pull request #80759 from Thra11/fix-rTimo Kaufmann2020-02-23
|\ \ | | | | | | Fix R
| * | R: fix build on aarch64 by removing a failing testTom Hall2020-02-22
| | | | | | | | | | | | | | | | | | I believe this test is currently incorrect on aarch64 and expects a warning about loss of precision with much smaller numbers than the platform's long doubles can handle.
| * | R: Enable java support on all platformsTom Hall2020-02-19
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* | | shogun: 6.0.0 -> 6.1.4Edward Tjörnhammar2020-02-21
| | | | | | | | | | | | | | | | | | | | | Also migrate to opencv3 to address #72739, the PR didn't build for me. Disable testing and ccache since they were broken. Co-authored-by: Robert Scott <code@humanleg.org.uk>
* | | Merge pull request #80576 from bhipple/u/rust-cargo-elanGabriel Ebner2020-02-20
|\ \ \ | | | | | | | | elan: upgrade cargo fetcher and cargoSha256
| * | | elan: upgrade cargo fetcher and cargoSha256Benjamin Hipple2020-02-19
| |/ / | | | | | | | | | Infra upgrade as part of #79975; ran `nixpkgs-review wip` successfully.
* / / geogebra: 5-0-570-0 -> 5-0-573-0Maximilian Bosch2020-02-20
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* | Merge pull request #80122 from r-ryantm/auto-update/kallistoDaniel Schaefer2020-02-15
|\ \ | | | | | | kallisto: 0.46.1 -> 0.46.2
| * | kallisto: 0.46.1 -> 0.46.2R. RyanTM2020-02-15
| |/ | | | | | | Co-authored-by: Daniel Schaefer <git@danielschaefer.me>
* | lean: 3.4.2 -> 3.5.1Junyoung Clare Jang2020-02-15
| | | | | | | | 3.4.2 is not compilable with GCC >= 9.1
* | verilator: 4.026 -> 4.028R. RyanTM2020-02-14
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* | treewide: change fetchCargoTarball default to opt-outBenjamin Hipple2020-02-13
|/ | | | | | | | | | | Changes the default fetcher in the Rust Platform to be the newer `fetchCargoTarball`, and changes every application using the current default to instead opt out. This commit does not change any hashes or cause any rebuilds. Once integrated, we will start deleting the opt-outs and recomputing hashes. See #79975 for details.
* Merge pull request #79778 from jbedo/dellyDmitry Kalinkin2020-02-11
|\ | | | | delly: 0.8.1 -> 0.8.2
| * delly: 0.8.1 -> 0.8.2Justin Bedo2020-02-11
| | | | | | | | Backported patch required for htslib 1.10.2
* | Merge pull request #79534 from r-ryantm/auto-update/lastRyan Mulligan2020-02-10
|\ \ | |/ |/| last: 1045 -> 1047
| * last: 1045 -> 1047R. RyanTM2020-02-08
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* | marvin: 20.3.0 -> 20.4.0Brenton Horne2020-02-10
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* | kicad-unstable: update update.sh && updateEvils2020-02-10
| | | | | | | | | | | | use /tmp instead of XDG_RUNTIME_DIR which is /run/user/1000, which defaults to 10% of RAM and kicad-packages3d needs ~6gb
* | kicad: simplify component namesEvils2020-02-10
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* | minc_tools: enable building conversion toolsBen Darwin2020-02-10
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* | minc_tools: 2017-09-11 -> unstable-2019-12-04Ben Darwin2020-02-10
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* | clp: 1.17.3 -> 1.17.5R. RyanTM2020-02-10
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* | verifast: 18.02 -> 19.12R. RyanTM2020-02-09
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* | pcb: 4.2.1 -> 4.2.2R. RyanTM2020-02-09
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* | Merge pull request #79293 from NixOS/staging-nextFrederik Rietdijk2020-02-09
|\ \ | | | | | | Staging next (with glibc 2.30)
| * \ Merge master into staging-nextFrederik Rietdijk2020-02-09
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| * \ \ Merge master into staging-nextFrederik Rietdijk2020-02-09
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| * \ \ \ Merge master into staging-nextFrederik Rietdijk2020-02-07
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| * | | | Merge staging-next into stagingFrederik Rietdijk2020-02-05
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| * \ \ \ \ Merge #66528: glibc: 2.27 -> 2.30 (into staging)Vladimír Čunát2020-02-05
| |\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | Includes update of stdenv bootstap tools (for three main platforms) and many package fixes with new glibc.
| | * \ \ \ \ Merge branch 'staging' into glibc230Maximilian Bosch2020-02-01
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| | * | | | | | pspp: 1.0.1 -> 1.2.0, fix build w/glibc-2.30Maximilian Bosch2020-01-30
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* | | | | | | | Merge pull request #79479 from r-ryantm/auto-update/workcraftRyan Mulligan2020-02-09
|\ \ \ \ \ \ \ \ | |_|_|_|_|_|_|/ |/| | | | | | | workcraft: 3.1.9 -> 3.2.5
| * | | | | | | workcraft: 3.1.9 -> 3.2.5R. RyanTM2020-02-07
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* | | | | | | iprover: 2018_Jul_24_11h -> 3.1Jannik Vierling2020-02-09
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* | | | | | librepcb: 0.1.2 -> 0.1.3 (#74786)Luz2020-02-09
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* | | | | | Merge pull request #79301 from Abdillah/patch-2Dmitry Kalinkin2020-02-09
|\ \ \ \ \ \ | | | | | | | | | | | | | | librepcb: Fix platform plugin xcb not found
| * | | | | | librepcb: Fix platform plugin xcb not foundHernawan Faïz Abdillah2020-02-06
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* | | | | | symbiyosys: 2019.10.11 -> 2020.02.08Emily2020-02-08
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* | | | | | Merge pull request #79557 from r-ryantm/auto-update/marvinRyan Mulligan2020-02-08
|\ \ \ \ \ \ | | | | | | | | | | | | | | marvin: 19.27.0 -> 20.3.0
| * | | | | | marvin: 19.27.0 -> 20.3.0R. RyanTM2020-02-08
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* | | | | | Merge pull request #79511 from r-ryantm/auto-update/gmshmarkuskowa2020-02-08
|\ \ \ \ \ \ | | | | | | | | | | | | | | gmsh: 4.5.1 -> 4.5.2
| * | | | | | gmsh: 4.5.1 -> 4.5.2R. RyanTM2020-02-08
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* | | | | | Merge pull request #79467 from r-ryantm/auto-update/picard-toolsRyan Mulligan2020-02-07
|\ \ \ \ \ \ | |/ / / / / |/| | | | | picard-tools: 2.21.6 -> 2.21.8
| * | | | | picard-tools: 2.21.6 -> 2.21.8R. RyanTM2020-02-07
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* | | | | eagle: 9.5.1 -> 9.5.2R. RyanTM2020-02-06
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* | | | | labelImg: 1.6.0 -> 1.8.1R. RyanTM2020-02-06
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