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* stacks: 2.52 -> 2.53R. RyanTM2020-05-10
* Merge pull request #86142 from bcdarwin/itk-5.1.0Dmitry Kalinkin2020-05-09
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| * ezminc: switch from itk5 to itk4 branchBen Darwin2020-05-05
* | Merge pull request #86216 from bcdarwin/mrtrix-updateMario Rodas2020-05-07
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| * mrtrix: 3.0_RC3_latest -> 3.0.0Ben Darwin2020-04-28
* | Merge pull request #86720 from r-ryantm/auto-update/picard-toolsMario Rodas2020-05-04
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| * | picard-tools: 2.22.2 -> 2.22.4R. RyanTM2020-05-04
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* / dcm2niix: 1.0.20190902 -> 1.0.20200331R. RyanTM2020-05-02
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* Merge pull request #70401 from bzizou/quastLassulus2020-04-24
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| * Quast: init at 5.0.2Bruno Bzeznik2020-04-24
* | mosdepth: 0.2.6 -> 0.2.9Justin Bedo2020-04-21
* | treewide: use blas and lapackMatthew Bauer2020-04-17
* | treewide: Per RFC45, remove all unquoted URLsMichael Reilly2020-04-10
* | picard-tools: 2.22.0 -> 2.22.2R. RyanTM2020-04-01
* | deeptools: 3.3.1 -> 3.4.1R. RyanTM2020-03-30
* | stacks: 2.41 -> 2.52R. RyanTM2020-03-30
* | Merge pull request #83464 from r-ryantm/auto-update/lastRyan Mulligan2020-03-27
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| * | last: 1047 -> 1060R. RyanTM2020-03-27
* | | seaview: 5.0 -> 5.0.2R. RyanTM2020-03-26
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* | Merge pull request #81706 from r-ryantm/auto-update/picard-toolsMario Rodas2020-03-04
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| * | picard-tools: 2.21.8 -> 2.22.0R. RyanTM2020-03-04
* | | truvari:1.3.2->1.3.4scalavision2020-03-02
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* | Merge pull request #80292 from bcdarwin/mrtrixLinus Heckemann2020-02-24
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| * | mrtrix: init at 3.0_RC3_latestBen Darwin2020-02-16
* | | kallisto: 0.46.1 -> 0.46.2R. RyanTM2020-02-15
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* | Merge pull request #79778 from jbedo/dellyDmitry Kalinkin2020-02-11
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| * | delly: 0.8.1 -> 0.8.2Justin Bedo2020-02-11
* | | Merge pull request #79534 from r-ryantm/auto-update/lastRyan Mulligan2020-02-10
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| * | last: 1045 -> 1047R. RyanTM2020-02-08
* | | minc_tools: enable building conversion toolsBen Darwin2020-02-10
* | | minc_tools: 2017-09-11 -> unstable-2019-12-04Ben Darwin2020-02-10
* | | picard-tools: 2.21.6 -> 2.21.8R. RyanTM2020-02-07
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* | Revert "Revert "Merge master into staging-next""Frederik Rietdijk2020-02-05
* | Revert "Merge master into staging-next"Frederik Rietdijk2020-02-05
* | SPAdes: 3.13.1 -> 3.14.0R. RyanTM2020-02-04
* | seaview: 4.7 -> 5.0R. RyanTM2020-01-30
* | Merge pull request #78265 from Synthetica9/https-homepagesSilvan Mosberger2020-01-27
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| * | treewide: fix redirected urlsPatrick Hilhorst2020-01-22
* | | manta: init 1.6.0Justin Bedo2020-01-24
* | | Merge pull request #78261 from r-ryantm/auto-update/picard-toolsRyan Mulligan2020-01-22
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| * | picard-tools: 2.21.3 -> 2.21.6R. RyanTM2020-01-22
* | | samtools: 1.9 -> 1.10Jonathan Ringer2020-01-19
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* | python.pkgs wide: fix problematic urlsJonathan Ringer2020-01-10
* | bayescan: init at 2.1 (#68191)Bruno Bzeznik2020-01-09
* | blast: init at 2.10.0 (#61430)Luis Pedro Coelho2020-01-07
* | last: 1042 -> 1045R. RyanTM2020-01-06
* | Merge master into staging-nextFrederik Rietdijk2020-01-03
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| * \ Merge pull request #76208 from r-ryantm/auto-update/bcftoolsRyan Mulligan2020-01-02
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| | * | bcftools: 1.9 -> 1.10.2R. RyanTM2019-12-22
* | | | Merge gcc-9 into staging (#68029)Frederik Rietdijk2019-12-30
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