diff options
Diffstat (limited to 'pkgs/top-level/python-packages.nix')
| -rw-r--r-- | pkgs/top-level/python-packages.nix | 530 |
1 files changed, 40 insertions, 490 deletions
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 97acbdbe4b8c..b4ec2cf73fc7 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -173,6 +173,8 @@ in { automat = callPackage ../development/python-modules/automat { }; + aws-xray-sdk = callPackage ../development/python-modules/aws-xray-sdk { }; + # packages defined elsewhere backports_csv = callPackage ../development/python-modules/backports_csv {}; @@ -482,25 +484,6 @@ in { }; }; - amqp_1 = buildPythonPackage rec { - name = "amqp-${version}"; - version = "1.4.9"; - disabled = pythonOlder "2.6"; - - src = pkgs.fetchurl { - url = "mirror://pypi/a/amqp/${name}.tar.gz"; - sha256 = "06n6q0kxhjnbfz3vn8x9yz09lwmn1xi9d6wxp31h5jbks0b4vsid"; - }; - - buildInputs = with self; [ mock coverage nose-cover3 unittest2 ]; - - meta = { - homepage = https://github.com/celery/py-amqp; - description = "Python client for the Advanced Message Queuing Procotol (AMQP). This is a fork of amqplib which is maintained by the Celery project"; - license = licenses.lgpl21; - }; - }; - amqp = buildPythonPackage rec { name = "amqp-${version}"; version = "2.1.4"; @@ -1020,44 +1003,9 @@ in { }; }; - backports_abc = buildPythonPackage rec { - name = "backports_abc-${version}"; - version = "0.4"; - - src = pkgs.fetchurl { - url = "mirror://pypi/b/backports_abc/${name}.tar.gz"; - sha256 = "8b3e4092ba3d541c7a2f9b7d0d9c0275b21c6a01c53a61c731eba6686939d0a5"; - }; + backports_abc = callPackage ../development/python-modules/backports_abc { }; - checkPhase = '' - ${python.interpreter} -m unittest discover - ''; - - meta = { - homepage = https://github.com/cython/backports_abc; - license = licenses.psfl; - description = "A backport of recent additions to the 'collections.abc' module"; - }; - }; - - backports_functools_lru_cache = buildPythonPackage rec { - name = "backports.functools_lru_cache-${version}"; - version = "1.3"; - - src = pkgs.fetchurl { - url = "mirror://pypi/b/backports_functools_lru_cache/${name}.tar.gz"; - sha256 = "444a21bcec4ae177da554321f81a78dc879eaa8f6ea9920cb904830585d31e95"; - }; - - buildInputs = with self; [ setuptools_scm ]; - doCheck = false; # No proper test - - meta = { - description = "Backport of functools.lru_cache"; - homepage = https://github.com/jaraco/backports.functools_lru_cache; - license = licenses.mit; - }; - }; + backports_functools_lru_cache = callPackage ../development/python-modules/backports_functools_lru_cache { }; backports_shutil_get_terminal_size = callPackage ../development/python-modules/backports_shutil_get_terminal_size { }; @@ -1090,23 +1038,7 @@ in { }; }; - backports_lzma = self.buildPythonPackage rec { - name = "backports.lzma-0.0.3"; - disabled = isPy3k; - - src = pkgs.fetchurl { - url = "mirror://pypi/b/backports.lzma/${name}.tar.gz"; - sha256 = "bac58aec8d39ac3d22250840fb24830d0e4a0ef05ad8f3f09172dc0cc80cdbca"; - }; - - buildInputs = [ pkgs.lzma ]; - - meta = { - description = "Backport of Python 3.3's 'lzma' module for XZ/LZMA compressed files"; - homepage = https://github.com/peterjc/backports.lzma; - license = licenses.bsd3; - }; - }; + backports_lzma = callPackage ../development/python-modules/backports_lzma { }; backports_tempfile = callPackage ../development/python-modules/backports_tempfile { }; @@ -1307,33 +1239,7 @@ in { }; }; - biopython = buildPythonPackage rec { - name = "biopython-${version}"; - version = "1.68"; - - src = pkgs.fetchurl { - url = "mirror://pypi/b/biopython/${name}.tar.gz"; - sha256 = "07qc7nz0k77y8hf8s18rscvibvm91zw0kkq7ylrhisf8vp8hkp6i"; - }; - - propagatedBuildInputs = with self; [ numpy ]; - # Checks try to write to $HOME, which does not work with nix - doCheck = false; - meta = { - description = "Python library for bioinformatics"; - - longDescription = '' - Biopython is a set of freely available tools for biological computation - written in Python by an international team of developers. It is a - distributed collaborative effort to develop Python libraries and - applications which address the needs of current and future work in - bioinformatics. - ''; - - homepage = http://biopython.org/wiki/Documentation; - maintainers = with maintainers; [ luispedro ]; - }; - }; + biopython = callPackage ../development/python-modules/biopython { }; bedup = buildPythonPackage rec { version = "0.10.1"; @@ -1406,25 +1312,7 @@ in { propagatedBuildInputs = with self; [ boto crcmod psutil ]; }; - cached-property = buildPythonPackage rec { - version = "1.3.0"; - name = "cached-property-${version}"; - - src = pkgs.fetchurl { - url = "mirror://pypi/c/cached-property/${name}.tar.gz"; - sha256 = "10dwi3s6f154ag9dvqy5jiwp31fs57lbxjcjgn4cwvi8qyqpi3j5"; - }; - - buildInputs = with self; [ freezegun ]; - - meta = { - description = "A decorator for caching properties in classes"; - homepage = https://github.com/pydanny/cached-property; - license = licenses.bsd3; - platforms = platforms.unix; - maintainers = with maintainers; [ ericsagnes ]; - }; - }; + cached-property = callPackage ../development/python-modules/cached-property { }; caffe = pkgs.caffe.override { python = self.python; @@ -1994,43 +1882,7 @@ in { }; }; - boto3 = buildPythonPackage rec { - name = "boto3-${version}"; - version = "1.4.8"; - - src = pkgs.fetchFromGitHub { - owner = "boto"; - repo = "boto3"; - rev = version; - sha256 = "11ysd7a9l5y98q7b7az56phsj2m7w90abf4jabwrknp2c43sq9bi"; - }; - - propagatedBuildInputs = [ self.botocore self.jmespath self.s3transfer ] ++ - (if isPy3k then [] else [self.futures]); - buildInputs = [ self.docutils self.nose self.mock ]; - checkPhase = '' - runHook preCheck - # This method is not in mock. It might have appeared in some versions. - sed -i 's/action.assert_called_once()/self.assertEqual(action.call_count, 1)/' \ - tests/unit/resources/test_factory.py - nosetests -d tests/unit --verbose - runHook postCheck - ''; - - # Network access - doCheck = false; - - meta = { - homepage = https://github.com/boto/boto3; - license = stdenv.lib.licenses.asl20; - description = "AWS SDK for Python"; - longDescription = '' - Boto3 is the Amazon Web Services (AWS) Software Development Kit (SDK) for - Python, which allows Python developers to write software that makes use of - services like Amazon S3 and Amazon EC2. - ''; - }; - }; + boto3 = callPackage ../development/python-modules/boto3 { }; botocore = callPackage ../development/python-modules/botocore { }; @@ -3124,22 +2976,7 @@ in { openidc-client = callPackage ../development/python-modules/openidc-client/default.nix {}; - idna = buildPythonPackage rec { - pname = "idna"; - version = "2.5"; - name = "${pname}-${version}"; - - src = fetchPypi { - inherit pname version; - sha256 = "3cb5ce08046c4e3a560fc02f138d0ac63e00f8ce5901a56b32ec8b7994082aab"; - }; - - meta = { - homepage = "http://github.com/kjd/idna/"; - description = "Internationalized Domain Names in Applications (IDNA)"; - license = "licenses.bsd3"; - }; - }; + idna = callPackage ../development/python-modules/idna { }; mahotas = buildPythonPackage rec { name = "python-mahotas-${version}"; @@ -3436,7 +3273,7 @@ in { }; }; - pytest = self.pytest_32; + pytest = self.pytest_33; pytest_27 = callPackage ../development/python-modules/pytest/2_7.nix {}; @@ -3451,7 +3288,16 @@ in { pytest = null; }; }; - pytest_32 = callPackage ../development/python-modules/pytest{ + + pytest_32 = callPackage ../development/python-modules/pytest/3_2.nix{ + hypothesis = self.hypothesis.override { + # hypothesis requires pytest that causes dependency cycle + doCheck = false; + pytest = null; + }; + }; + + pytest_33 = callPackage ../development/python-modules/pytest/default.nix{ hypothesis = self.hypothesis.override { # hypothesis requires pytest that causes dependency cycle doCheck = false; @@ -4255,21 +4101,7 @@ in { }; }; - decorator = buildPythonPackage rec { - name = "decorator-${version}"; - version = "4.0.11"; - - src = pkgs.fetchurl { - url = "mirror://pypi/d/decorator/${name}.tar.gz"; - sha256 = "953d6bf082b100f43229cf547f4f97f97e970f5ad645ee7601d55ff87afdfe76"; - }; - - meta = { - homepage = https://pypi.python.org/pypi/decorator; - description = "Better living through Python with decorators"; - license = licenses.mit; - }; - }; + decorator = callPackage ../development/python-modules/decorator { }; deform = buildPythonPackage rec { name = "deform-2.0a2"; @@ -5709,25 +5541,7 @@ in { }; }; - jdcal = buildPythonPackage rec { - version = "1.0"; - name = "jdcal-${version}"; - - src = pkgs.fetchFromGitHub { - owner = "phn"; - repo = "jdcal"; - rev = "v${version}"; - sha256 = "0jjgrrylraqzk3n97hay4gj00ky6vlvkfaapfgqlbcxyq30j24vq"; - }; - - meta = { - description = "A module containing functions for converting between Julian dates and calendar dates"; - homepage = "https://github.com/phn/jdcal"; - license = licenses.bsd2; - maintainers = with maintainers; [ lihop ]; - platforms = platforms.all; - }; - }; + jdcal = callPackage ../development/python-modules/jdcal { }; internetarchive = callPackage ../development/python-modules/internetarchive {}; @@ -5739,6 +5553,8 @@ in { jsonpatch = callPackage ../development/python-modules/jsonpatch { }; + jsonpickle = callPackage ../development/python-modules/jsonpickle { }; + jsonpointer = buildPythonPackage rec { name = "jsonpointer-1.9"; @@ -6844,37 +6660,7 @@ in { pysrt = callPackage ../development/python-modules/pysrt { }; - pytools = buildPythonPackage rec { - name = "pytools-${version}"; - version = "2017.4"; - - src = pkgs.fetchFromGitHub { - owner = "inducer"; - repo = "pytools"; - rev = "8078e74265bb5a3c9676c698595ab5450cd2bfe7"; - sha256 = "17q61l79fcxkj5jxg3fnymi652sdjp5s6kpsabgxp22kma9crr28"; - }; - - buildInputs = with self; [ - decorator - appdirs - six - numpy - pytest - ]; - - checkPhase = '' - py.test -k 'not test_persistent_dict' - ''; - - meta = { - homepage = https://github.com/inducer/pytools/; - description = "Miscellaneous Python lifesavers."; - license = licenses.mit; - maintainers = with maintainers; [ artuuge ]; - }; - - }; + pytools = callPackage ../development/python-modules/pytools { }; pytun = buildPythonPackage rec { name = "pytun-${version}"; @@ -7028,21 +6814,7 @@ in { hyperlink = callPackage ../development/python-modules/hyperlink {}; - zope_copy = buildPythonPackage rec { - name = "zope.copy-4.0.2"; - - src = pkgs.fetchurl { - url = "mirror://pypi/z/zope.copy/${name}.zip"; - sha256 = "eb2a95866df1377741876a3ee62d8600e80089e6246e1a235e86791b29534457"; - }; - - buildInputs = with self; [ zope_interface zope_location zope_schema ]; - - meta = { - maintainers = with maintainers; [ domenkozar ]; - }; - }; - + zope_copy = callPackage ../development/python-modules/zope_copy {}; ssdeep = buildPythonPackage rec { name = "ssdeep-3.1.1"; @@ -9281,37 +9053,7 @@ in { }; - html5lib = buildPythonPackage (rec { - version = "0.999999999"; - name = "html5lib-${version}"; - - src = pkgs.fetchurl { - url = "http://github.com/html5lib/html5lib-python/archive/${version}.tar.gz"; - sha256 = "09j6194f5mlnd5xwbavwvnndwl1x91jw74shxl6hcxjp4fxg3h05"; - }; - - buildInputs = with self; [ flake8 pytest pytest-expect mock ]; - propagatedBuildInputs = with self; [ - six webencodings - ] ++ optionals isPy26 [ ordereddict ]; - - checkPhase = '' - py.test - ''; - - meta = { - homepage = https://github.com/html5lib/html5lib-python; - downloadPage = https://github.com/html5lib/html5lib-python/releases; - description = "HTML parser based on WHAT-WG HTML5 specification"; - longDescription = '' - html5lib is a pure-python library for parsing HTML. It is designed to - conform to the WHATWG HTML specification, as is implemented by all - major web browsers. - ''; - license = licenses.mit; - maintainers = with maintainers; [ domenkozar prikhi ]; - }; - }); + html5lib = callPackage ../development/python-modules/html5lib { }; http_signature = buildPythonPackage (rec { name = "http_signature-0.1.4"; @@ -9750,26 +9492,7 @@ in { iso3166 = callPackage ../development/python-modules/iso3166 {}; - iso8601 = buildPythonPackage rec { - name = "iso8601-${version}"; - version = "0.1.11"; - src = pkgs.fetchurl { - url = "mirror://pypi/i/iso8601/${name}.tar.gz"; - sha256 = "e8fb52f78880ae063336c94eb5b87b181e6a0cc33a6c008511bac9a6e980ef30"; - }; - - buildInputs = [ self.pytest ]; - - checkPhase = '' - py.test iso8601 - ''; - - meta = { - homepage = https://bitbucket.org/micktwomey/pyiso8601/; - description = "Simple module to parse ISO 8601 dates"; - maintainers = with maintainers; [ phreedom ]; - }; - }; + iso8601 = callPackage ../development/python-modules/iso8601 { }; isort = buildPythonPackage rec { name = "${pname}-${version}"; @@ -9884,6 +9607,8 @@ in { jsondate = callPackage ../development/python-modules/jsondate { }; + jsondiff = callPackage ../development/python-modules/jsondiff { }; + jsonnet = buildPythonPackage { inherit (pkgs.jsonnet) name src; # Python 3 is not yet supported https://github.com/google/jsonnet/pull/335 @@ -9982,33 +9707,6 @@ in { koji = callPackage ../development/python-modules/koji { }; - kombu_3 = buildPythonPackage rec { - name = "kombu-${version}"; - version = "3.0.35"; - - disabled = pythonOlder "2.6"; - - src = pkgs.fetchurl { - url = "mirror://pypi/k/kombu/${name}.tar.gz"; - sha256 = "09xpxpjz9nk8d14dj361dqdwyjwda3jlf1a7v6jif9wn2xm37ar2"; - }; - - # most of these are simply to allow the test suite to do its job - buildInputs = with self; optionals isPy27 [ mock unittest2 nose redis qpid-python pymongo sqlalchemy pyyaml msgpack boto ]; - - propagatedBuildInputs = with self; [ amqp_1 anyjson ] ++ - (optionals (pythonOlder "2.7") [ importlib ordereddict ]); - - # tests broken on python 2.6? https://github.com/nose-devs/nose/issues/806 - doCheck = isPy27; - - meta = { - description = "Messaging library for Python"; - homepage = "http://github.com/celery/kombu"; - license = licenses.bsd3; - }; - }; - kombu = buildPythonPackage rec { name = "kombu-${version}"; version = "4.0.2"; @@ -10295,7 +9993,7 @@ in { locustio = callPackage ../development/python-modules/locustio { }; - llvmlite = callPackage ../development/python-modules/llvmlite {llvm=pkgs.llvm_4;}; + llvmlite = callPackage ../development/python-modules/llvmlite {llvm=pkgs.llvm_5;}; lockfile = buildPythonPackage rec { pname = "lockfile"; @@ -10325,25 +10023,7 @@ in { logilab-constraint = callPackage ../development/python-modules/logilab/constraint.nix {}; - lxml = buildPythonPackage ( rec { - name = "lxml-3.8.0"; - - src = pkgs.fetchurl { - url = "mirror://pypi/l/lxml/${name}.tar.gz"; - sha256 = "15nvf6n285n282682qyw3wihsncb0x5amdhyi4b83bfa2nz74vvk"; - }; - - buildInputs = with self; [ pkgs.libxml2 pkgs.libxslt ]; - - hardeningDisable = stdenv.lib.optional stdenv.isDarwin "format"; - - meta = { - description = "Pythonic binding for the libxml2 and libxslt libraries"; - homepage = http://lxml.de; - license = licenses.bsd3; - maintainers = with maintainers; [ sjourdois ]; - }; - }); + lxml = callPackage ../development/python-modules/lxml {inherit (pkgs) libxml2 libxslt;}; lxc = buildPythonPackage (rec { name = "python-lxc-unstable-2016-08-25"; @@ -10440,28 +10120,7 @@ in { }; }; - - Mako = buildPythonPackage rec { - name = "Mako-1.0.4"; - - src = pkgs.fetchurl { - url = "mirror://pypi/M/Mako/${name}.tar.gz"; - sha256 = "0nchpw6akfcsg8w6irjlx0gyzadc123hv4g47sijgnqd9nz9vngy"; - }; - - buildInputs = with self; [ markupsafe nose mock pytest ]; - propagatedBuildInputs = with self; [ markupsafe ]; - - doCheck = !isPyPy; # https://bitbucket.org/zzzeek/mako/issue/238/2-tests-failed-on-pypy-24-25 - - meta = { - description = "Super-fast templating language"; - homepage = http://www.makotemplates.org; - license = licenses.mit; - platforms = platforms.unix; - maintainers = with maintainers; [ domenkozar ]; - }; - }; + Mako = callPackage ../development/python-modules/Mako { }; manifestparser = callPackage ../development/python-modules/marionette-harness/manifestparser.nix {}; marionette_driver = callPackage ../development/python-modules/marionette-harness/marionette_driver.nix {}; @@ -10518,22 +10177,7 @@ in { }; }; - markdown = buildPythonPackage rec { - version = "2.6.8"; - name = "markdown-${version}"; - - src = pkgs.fetchurl { - url = "mirror://pypi/M/Markdown/Markdown-${version}.tar.gz"; - sha256 = "0cqfhr1km2s5d8jm6hbwgkrrj9hvkjf2gab3s2axlrw1clgaij0a"; - }; - - # error: invalid command 'test' - doCheck = false; - - meta = { - homepage = http://www.freewisdom.org/projects/python-markdown; - }; - }; + markdown = callPackage ../development/python-modules/markdown { }; markdownsuperscript = callPackage ../development/python-modules/markdownsuperscript {}; @@ -15696,23 +15340,7 @@ in { pyxattr = callPackage ../development/python-modules/pyxattr { }; - pyaml = buildPythonPackage (rec { - name = "pyaml-15.02.1"; - disabled = !isPy27; - - src = pkgs.fetchurl { - url = "mirror://pypi/p/pyaml/${name}.tar.gz"; - sha256 = "8dfe1b295116115695752acc84d15ecf5c1c469975fbed7672bf41a6bc6d6d51"; - }; - - buildInputs = with self; [ pyyaml ]; - - meta = { - description = "PyYAML-based module to produce pretty and readable YAML-serialized data"; - homepage = https://github.com/mk-fg/pretty-yaml; - }; - }); - + pyaml = callPackage ../development/python-modules/pyaml { }; pyyaml = buildPythonPackage (rec { name = "PyYAML-3.12"; @@ -18012,28 +17640,7 @@ in { }; }; - structlog = buildPythonPackage rec { - name = "structlog-16.1.0"; - - src = pkgs.fetchurl { - url = "mirror://pypi/s/structlog/${name}.tar.gz"; - sha256 = "00dywyg3bqlkrmbrfrql21hpjjjkc4zjd6xxjyxyd15brfnzlkdl"; - }; - - buildInputs = with self; [ pytest pretend freezegun ]; - propagatedBuildInputs = with self; [ simplejson ]; - - checkPhase = '' - rm tests/test_twisted.py* - py.test - ''; - - meta = { - description = "Painless structural logging"; - homepage = http://www.structlog.org/; - license = licenses.asl20; - }; - }; + structlog = callPackage ../development/python-modules/structlog { }; svgwrite = buildPythonPackage rec { name = "svgwrite-${version}"; @@ -18317,39 +17924,9 @@ in { }; - extras = buildPythonPackage rec { - name = "extras-${version}"; - version = "0.0.3"; + extras = callPackage ../development/python-modules/extras { }; - src = pkgs.fetchurl { - url = "mirror://pypi/e/extras/extras-${version}.tar.gz"; - sha256 = "1h7zx4dfyclalg0fqnfjijpn0f793a9mx8sy3b27gd31nr6dhq3s"; - }; - - # error: invalid command 'test' - doCheck = false; - - meta = { - description = "A module provides basic functions for parsing mime-type names and matching them against a list of media-ranges"; - homepage = https://code.google.com/p/mimeparse/; - license = licenses.mit; - }; - }; - - texttable = self.buildPythonPackage rec { - name = "texttable-0.8.4"; - - src = pkgs.fetchurl { - url = "mirror://pypi/t/texttable/${name}.tar.gz"; - sha256 = "0bkhs4dx9s6g7fpb969hygq56hyz4ncfamlynw72s0n6nqfbd1w5"; - }; - - meta = { - description = "A module to generate a formatted text table, using ASCII characters"; - homepage = http://foutaise.org/code/; - license = licenses.lgpl2; - }; - }; + texttable = callPackage ../development/python-modules/texttable { }; tiros = callPackage ../development/python-modules/tiros { }; @@ -18432,19 +18009,7 @@ in { toolz = callPackage ../development/python-modules/toolz { }; - tox = buildPythonPackage rec { - name = "tox-${version}"; - version = "2.4.1"; - - propagatedBuildInputs = with self; [ py virtualenv pluggy ]; - - doCheck = false; - - src = pkgs.fetchurl { - url = "mirror://pypi/t/tox/${name}.tar.gz"; - sha256 = "1nwn4jz8ns53n17bm1xkzlz4zyyxbgjwrcg2cjsn25ab7hd5fwv6"; - }; - }; + tox = callPackage ../development/python-modules/tox { }; tqdm = callPackage ../development/python-modules/tqdm { }; @@ -21907,22 +21472,7 @@ EOF }; }; - pluggy = buildPythonPackage rec { - name = "pluggy-${version}"; - version = "0.3.1"; - - src = pkgs.fetchurl { - url = "mirror://pypi/p/pluggy/${name}.tar.gz"; - sha256 = "18qfzfm40bgx672lkg8q9x5hdh76n7vax99aank7vh2nw21wg70m"; - }; - - meta = { - description = "Plugin and hook calling mechanisms for Python"; - homepage = "https://pypi.python.org/pypi/pluggy"; - license = licenses.mit; - maintainers = with maintainers; [ jgeerds ]; - }; - }; + pluggy = callPackage ../development/python-modules/pluggy {}; xcffib = buildPythonPackage rec { version = "0.3.2"; |