diff options
Diffstat (limited to 'pkgs/top-level/python-packages.nix')
| -rw-r--r-- | pkgs/top-level/python-packages.nix | 386 |
1 files changed, 359 insertions, 27 deletions
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 9fe5a47a9e61..c59632776719 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -825,7 +825,7 @@ in modules // { windowsSupport = true; propagatedBuildInputs = with self; [ - paramiko jinja2 pyyaml httplib2 boto six + pycrypto paramiko jinja2 pyyaml httplib2 boto six ] ++ optional windowsSupport pywinrm; meta = { @@ -858,7 +858,7 @@ in modules // { windowsSupport = true; propagatedBuildInputs = with self; [ - paramiko jinja2 pyyaml httplib2 boto six readline + pycrypto paramiko jinja2 pyyaml httplib2 boto six readline ] ++ optional windowsSupport pywinrm; meta = with stdenv.lib; { @@ -1214,6 +1214,27 @@ in modules // { }; }); + attrs = buildPythonPackage (rec { + pname = "attrs"; + version = "16.0.0"; + name = "attrs-16.0.0"; + src = pkgs.fetchurl { + url = "mirror://pypi/a/attrs/${name}.tar.gz"; + sha256 = "1g4asv3hbx5aqz7hjzq3q6ss2cpv1rdv66sp5d21cdyjajj2fs6y"; + }; + + # Mac OS X needs clang for testing + buildInputs = with self; [ pytest hypothesis zope_interface + pympler coverage ] + ++ optionals (stdenv.isDarwin) [ pkgs.clang ]; + + meta = { + description = "Python attributes without boilerplate"; + homepage = https://github.com/hynek/attrs; + license = licenses.mit; + }; + }); + audioread = buildPythonPackage rec { name = "audioread-${version}"; version = "2.1.1"; @@ -4004,11 +4025,12 @@ in modules // { cryptography = buildPythonPackage rec { # also bump cryptography_vectors - name = "cryptography-1.2.3"; + name = "cryptography-${version}"; + version = "1.4"; src = pkgs.fetchurl { url = "mirror://pypi/c/cryptography/${name}.tar.gz"; - sha256 = "0kj511z4g21fhcr649pyzpl0zzkkc7hsgxxjys6z8wwfvmvirccf"; + sha256 = "0a6i4914ychryj7kqqmf970incynj5lzx57n3cbv5i4hxm09a55v"; }; buildInputs = [ pkgs.openssl self.pretend self.cryptography_vectors @@ -4024,11 +4046,12 @@ in modules // { cryptography_vectors = buildPythonPackage rec { # also bump cryptography - name = "cryptography_vectors-1.2.3"; + name = "cryptography_vectors-${version}"; + version = "1.4"; src = pkgs.fetchurl { url = "mirror://pypi/c/cryptography-vectors/${name}.tar.gz"; - sha256 = "0shawgpax79gvjrj0a313sll9gaqys7q1hxngn6j4k24lmz7bwki"; + sha256 = "1sk6yhphk2k2vzshi0djxi0jsxd9a02259bs8gynfgf5y1g82a07"; }; }; @@ -5443,11 +5466,11 @@ in modules // { dill = buildPythonPackage rec { name = "dill-${version}"; - version = "0.2.4"; + version = "0.2.5"; src = pkgs.fetchurl { url = "mirror://pypi/d/dill/${name}.tgz"; - sha256 = "deca57da33ad2121ab1b9c4493bf8eb2b3a72b6426d4b9a3a853a073c68b97ca"; + sha256 = "431c9d46e190dcdf1397234cf659d66e2e22e33b0474ed6ee2d0b16c9c0ea319"; }; propagatedBuildInputs = with self; [objgraph]; @@ -6497,7 +6520,13 @@ in modules // { sha256 = "1yrdxcj5rzvz8iglircz6icvyggz5fmdcd010n6w3j60yp4p84kc"; }; + # https://github.com/AGProjects/python-gnutls/issues/2 + disabled = isPy3k; + propagatedBuildInputs = with self; [ pkgs.gnutls ]; + patchPhase = '' + substituteInPlace gnutls/library/__init__.py --replace "/usr/local/lib" "${pkgs.gnutls33.out}/lib" + ''; }; gitdb = buildPythonPackage rec { @@ -7438,13 +7467,13 @@ in modules // { netcdf4 = buildPythonPackage rec { name = "netCDF4-${version}"; - version = "1.2.1"; + version = "1.2.4"; disabled = isPyPy; src = pkgs.fetchurl { url = "mirror://pypi/n/netCDF4/${name}.tar.gz"; - sha256 = "0wzg73zyjjhns4209vrcvh71gs392d16ynz76x3pl1xg2by723iy"; + sha256 = "0lakjix9dhc26f33f03c13ffwspqcrk5j3mnnjczwxbb23ppwwx6"; }; propagatedBuildInputs = with self ; [ @@ -7751,6 +7780,29 @@ in modules // { }; }; + pycallgraph = buildPythonPackage rec { + name = "pycallgraph-${version}"; + version = "1.0.1"; + + src = pkgs.fetchurl { + url = mirror://pypi/p/pycallgraph/pycallgraph-1.0.1.tar.gz; + sha256 = "0w8yr43scnckqcv5nbyd2dq4kpv74ai856lsdsf8iniik07jn9mi"; + }; + + buildInputs = with self; [ pytest ]; + + # Tests do not work due to this bug: https://github.com/gak/pycallgraph/issues/118 + doCheck = false; + + meta = { + homepage = http://pycallgraph.slowchop.com; + description = "Call graph visualizations for Python applications"; + maintainers = with maintainers; [ auntie ]; + license = licenses.gpl2; + platform = platforms.all; + }; + }; + pycares = buildPythonPackage rec { name = "pycares-${version}"; version = "1.0.0"; @@ -9134,6 +9186,26 @@ in modules // { }; }; + django_environ = buildPythonPackage rec { + name = "django-environ-${version}"; + version = "0.4.0"; + + src = pkgs.fetchurl { + url = "mirror://pypi/d/django-environ/${name}.tar.gz"; + sha256 = "0i32vsgk1xmwpi7i6f6v5hg653y9dl0fsz5qmv94skz6hwgm5kvh"; + }; + + # The testsuite fails to modify the base environment + doCheck = false; + propagatedBuildInputs = with self ; [ django six ]; + + meta = { + description = "Utilize environment variables to configure your Django application"; + homepage = https://github.com/joke2k/django-environ/; + license = licenses.mit; + }; + }; + django_evolution = buildPythonPackage rec { name = "django_evolution-0.7.5"; disabled = isPy3k; @@ -9151,6 +9223,28 @@ in modules // { }; }; + django_guardian = buildPythonPackage rec { + name = "django-guardian-${version}"; + version = "1.4.4"; + + src = pkgs.fetchurl { + url = "mirror://pypi/d/django-guardian/${name}.tar.gz"; + sha256 = "1m7y3brk3697hr2cvkzl8dry4pp7wkmhvxmf8db1ardz1r9d8895"; + }; + + buildInputs = with self ; [ pytestrunner pytestdjango django_environ mock sqlite3 ]; + propagatedBuildInputs = with self ; [ django six ]; + + checkPhase = '' + ${python.interpreter} nix_run_setup.py test --addopts="--ignore build" + ''; + + meta = { + description = "Per object permissions for Django"; + homepage = https://github.com/django-guardian/django-guardian; + licenses = [ licenses.mit licenses.bsd2 ]; + }; + }; django_tagging = buildPythonPackage rec { name = "django-tagging-0.3.1"; @@ -9220,11 +9314,11 @@ in modules // { django_nose = buildPythonPackage rec { name = "django-nose-${version}"; - version = "1.4.3"; + version = "1.4.4"; src = pkgs.fetchurl { url = "mirror://pypi/d/django-nose/${name}.tar.gz"; - sha256 = "0rl9ipa98smprlw56xqlhzhps28p84wg0640qlyn0rjyrpsdmf0r"; + sha256 = "1fm47fkza2lk0xgc6qpi9vs78zg7q8cgl6mdan69sbycgy909ff0"; }; # vast dependency list @@ -11678,12 +11772,12 @@ in modules // { }; ipython = buildPythonPackage rec { - version = "5.0.0"; + version = "5.1.0"; name = "ipython-${version}"; src = pkgs.fetchurl { url = "mirror://pypi/i/ipython/${name}.tar.gz"; - sha256 = "7ec0737169c74056c7fc8298246db5478a2d6c90cfd19c3253222112357545df"; + sha256 = "7ef4694e1345913182126b219aaa4a0047e191af414256da6772cf249571b961"; }; prePatch = stdenv.lib.optionalString stdenv.isDarwin '' @@ -12161,6 +12255,22 @@ in modules // { }; }; + klein = buildPythonPackage rec { + name = "klein-15.3.1"; + src = pkgs.fetchurl { + url = "mirror://pypi/k/klein/${name}.tar.gz"; + sha256 = "1hl2psnn1chm698rimyn9dgcpl1mxgc8dj11b3ipp8z37yfjs3z9"; + }; + + propagatedBuildInputs = with self; [ werkzeug twisted ]; + + meta = { + description = "Klein Web Micro-Framework"; + homepage = "https://github.com/twisted/klein"; + license = licenses.mit; + }; + }; + kombu = buildPythonPackage rec { name = "kombu-${version}"; version = "3.0.35"; @@ -13451,6 +13561,27 @@ in modules // { }; }; + multiprocess = buildPythonPackage rec { + name = "multiprocess-${version}"; + version = "0.70.4"; + + src = pkgs.fetchurl { + url = "mirror://pypi/m/multiprocess/${name}.tgz"; + sha256 = "73f8b9b7009860e3c3c8b9bdcad7e8366b130929775f89c114d4346a9cfcb31b"; + }; + + propagatedBuildInputs = with self; [ dill ]; + + # Python-version dependent tests + doCheck = false; + + meta = { + description = "Better multiprocessing and multithreading in python"; + homepage = https://github.com/uqfoundation; + license = licenses.bsd3; + }; + }; + munkres = buildPythonPackage rec { name = "munkres-1.0.6"; @@ -13700,6 +13831,31 @@ in modules // { }; }; + pympler = buildPythonPackage rec { + pname = "Pympler"; + version = "0.4.3"; + name = "${pname}-${version}"; + + src = pkgs.fetchurl { + url = "mirror://pypi/P/${pname}/${name}.tar.gz"; + sha256 = "0mhyxqlkha98y8mi5zqcjg23r30mgdjdzs05lghbmqfdyvzjh1a3"; + }; + + # Remove test asizeof.flatsize(), broken and can be missed as + # test is only useful on python 2.5, see https://github.com/pympler/pympler/issues/22 + patchPhase = '' + substituteInPlace ./test/asizeof/test_asizeof.py --replace "n, e = test_flatsize" "#n, e = test_flatsize" + substituteInPlace ./test/asizeof/test_asizeof.py --replace "self.assert_(n," "#self.assert_(n," + substituteInPlace ./test/asizeof/test_asizeof.py --replace "self.assert_(not e" "#self.assert_(not e" + ''; + + meta = { + description = "Tool to measure, monitor and analyze memory behavior"; + homepage = http://pythonhosted.org/Pympler/; + license = licenses.asl20; + }; + }; + pymysql = buildPythonPackage rec { name = "pymysql-${version}"; version = "0.6.6"; @@ -14562,6 +14718,51 @@ in modules // { }; }; + Nuitka = let + # scons is needed but using it requires Python 2.7 + # Therefore we create a separate env for it. + scons = pkgs.python27.withPackages(ps: [ pkgs.scons ]); + in buildPythonPackage rec { + version = "0.5.21.3"; + name = "Nuitka-${version}"; + + # Latest version is not yet on PyPi + src = pkgs.fetchurl { + url = "https://github.com/kayhayen/Nuitka/archive/${version}.tar.gz"; + sha256 = "1i2069hxb94q9kkwcbky59fin8hk1vlj90lwgmrdhn1srvig1cq3"; + }; + + buildInputs = with self; stdenv.lib.optionals doCheck [ vmprof pyqt4 ]; + + propagatedBuildInputs = [ scons ]; + + postPatch = '' + patchShebangs tests/run-tests + '' + stdenv.lib.optionalString stdenv.isLinux '' + substituteInPlace nuitka/plugins/standard/ImplicitImports.py --replace 'locateDLL("uuid")' '"${pkgs.utillinux.out}/lib/libuuid.so"' + ''; + + # We do not want any wrappers here. + postFixup = ''''; + + checkPhase = '' + tests/run-tests + ''; + + # Problem with a subprocess (parts) + doCheck = false; + + # Requires CPython + disabled = isPyPy; + + meta = { + description = "Python compiler with full language support and CPython compatibility"; + license = licenses.asl20; + homepage = http://nuitka.net/; + }; + }; + + buildNumpyPackage = callPackage ../development/python-modules/numpy.nix { gfortran = pkgs.gfortran; blas = pkgs.openblasCompat; @@ -16480,14 +16681,15 @@ in modules // { }; paramiko = buildPythonPackage rec { - name = "paramiko-1.15.1"; + name = "paramiko-${version}"; + version = "2.0.2"; src = pkgs.fetchurl { url = "mirror://pypi/p/paramiko/${name}.tar.gz"; - sha256 = "6ed97e2281bb48728692cdc621f6b86a65fdc1d46b178ce250cfec10b977a04c"; + sha256 = "1p21s7psqj18k9a97nq26yas058i5ivzk7pi7y98l1rbl87zj6s1"; }; - propagatedBuildInputs = with self; [ pycrypto ecdsa ]; + propagatedBuildInputs = with self; [ cryptography cryptography_vectors ]; # https://github.com/paramiko/paramiko/issues/449 doCheck = !(isPyPy || isPy33); @@ -16535,8 +16737,27 @@ in modules // { license = with licenses; [ bsd3 ]; homepage = http://github.com/dask/partd/; }; + }; + pathos = buildPythonPackage rec { + name = "pathos-${version}"; + version = "0.2.0"; + + src = pkgs.fetchurl { + url = "mirror://pypi/p/pathos/${name}.tgz"; + sha256 = "e35418af733bf434da83746d46acca94375d6e306b3df330b2a1808db026a188"; + }; + + propagatedBuildInputs = with self; [ dill pox ppft multiprocess ]; + # Require network + doCheck = false; + + meta = { + description = "Parallel graph management and execution in heterogeneous computing"; + homepage = http://www.cacr.caltech.edu/~mmckerns/pathos.htm; + license = licenses.bsd3; + }; }; patsy = buildPythonPackage rec { @@ -17158,12 +17379,12 @@ in modules // { pysftp = buildPythonPackage rec { name = "pysftp-${version}"; - version = "0.2.8"; + version = "0.2.9"; disabled = isPyPy; src = pkgs.fetchurl { url = "mirror://pypi/p/pysftp/${name}.tar.gz"; - sha256 = "1d69z8yngciksch1i8rivy1xl8f6g6sb7c3kk5cm3pf8304q6hhm"; + sha256 = "0jl5qix5cxzrv4lb8rfpjkpcghbkacnxkb006ikn7mkl5s05mxgv"; }; propagatedBuildInputs = with self; [ paramiko ]; @@ -17402,7 +17623,39 @@ in modules // { }; }; + pox = buildPythonPackage rec { + name = "pox-${version}"; + version = "0.2.2"; + src = pkgs.fetchurl { + url = "mirror://pypi/p/pox/${name}.tgz"; + sha256 = "22e97ac6d2918c754e65a9581dbe02e9d00ae4a54ca48d05118f87c1ea92aa19"; + }; + + meta = { + description = "Utilities for filesystem exploration and automated builds"; + license = licenses.bsd3; + homepage = http://www.cacr.caltech.edu/~mmckerns/pox.htm; + }; + }; + + ppft = buildPythonPackage rec { + name = "ppft-${version}"; + version = "1.6.4.6"; + + src = pkgs.fetchurl { + url = "mirror://pypi/p/ppft/${name}.tgz"; + sha256 = "6f99c861822884cb00badbd5f364ee32b90a157084a6768040793988c6b92bff"; + }; + + propagatedBuildInputs = with self; [ six ]; + + meta = { + description = "Distributed and parallel python"; + homepage = https://github.com/uqfoundation; + license = licenses.bsd3; + }; + }; praw = buildPythonPackage rec { name = "praw-3.5.0"; @@ -17501,6 +17754,7 @@ in modules // { protobuf = self.protobuf2_6; protobuf3_0 = (self.protobufBuild pkgs.protobuf3_0).override { doCheck = false; }; + protobuf3_0_0b2 = (self.protobufBuild pkgs.protobuf3_0_0b2).override { doCheck = false; }; protobuf2_6 = self.protobufBuild pkgs.protobuf2_6; protobuf2_5 = self.protobufBuild pkgs.protobuf2_5; protobufBuild = protobuf: buildPythonPackage rec { @@ -18164,6 +18418,21 @@ in modules // { }; }); + pydispatcher = buildPythonPackage (rec { + version = "2.0.5"; + disabled = isPy35; + name = "pydispatcher-${version}"; + src = pkgs.fetchurl { + url = "mirror://pypi/P/PyDispatcher/PyDispatcher-${version}.tar.gz"; + sha256 = "1bswbmhlbqdxlgbxlb6xrlm4k253sg8nvpl1whgsys8p3fg0cw2m"; + }; + + meta = { + homepage = http://pydispatcher.sourceforge.net/; + description = "Signal-registration and routing infrastructure for use in multiple contexts"; + license = licenses.bsd3; + }; + }); pydot = buildPythonPackage rec { name = "pydot-1.0.2"; @@ -21494,6 +21763,23 @@ in modules // { }; }; + sqlobject = buildPythonPackage rec { + version = "3.0.0"; + name = "sqlobject-${version}"; + src = pkgs.fetchurl { + url = "mirror://pypi/S/SQLObject/SQLObject-${version}.tar.gz"; + sha256 = "15g3g7f4yiyplqf54px1dsnmrw3jb7xwx97z8qzgp9ijmm5vpr8r"; + }; + + propagatedBuildInputs = with self; [ pydispatcher FormEncode ]; + + meta = { + description = "Object Relational Manager for providing an object interface to your database"; + homepage = "http://www.sqlobject.org/"; + license = licenses.lgpl21; + }; + }; + pgpdump = self.buildPythonPackage rec { name = "pgpdump-1.5"; @@ -23997,11 +24283,11 @@ in modules // { }; virtualenv = buildPythonPackage rec { - name = "virtualenv-13.1.2"; + name = "virtualenv-15.0.3"; src = pkgs.fetchurl { url = "mirror://pypi/v/virtualenv/${name}.tar.gz"; - sha256 = "1p732accxwqfjbdna39k8w8lp9gyw91vr4kzkhm8mgfxikqqxg5a"; + sha256 = "6d9c760d3fc5fa0894b0f99b9de82a4647e1164f0b700a7f99055034bf548b1d"; }; pythonPath = [ self.recursivePthLoader ]; @@ -24107,6 +24393,29 @@ in modules // { }; }); + vmprof = buildPythonPackage rec { + version = "0.3.3"; + name = "vmprof-${version}"; + + # Url using old scheme doesn't seem to work + src = pkgs.fetchurl { + url = "https://files.pythonhosted.org/packages/c3/f3/f039ca77e727c5c2d3e61967a2a5c9ecc0ef6ca235012fd5559febb77cd0/vmprof-0.3.3.tar.gz"; + sha256 = "991bc2f1dc824c63e9b399f9e8606deded92a52378d0e449f258807d7556b039"; + }; + + propagatedBuildInputs = with self; [ requests2 six]; + + # No tests included + doCheck = false; + + meta = { + description = "A vmprof client"; + license = licenses.mit; + homepage = https://vmprof.readthedocs.org/; + }; + + }; + vultr = buildPythonPackage rec { version = "0.1.2"; name = "vultr-${version}"; @@ -25795,7 +26104,7 @@ in modules // { postPatch = '' libusb=${pkgs.libusb1.out}/lib/libusb-1.0.so test -f $libusb || { echo "ERROR: $libusb doesn't exist, please update/fix this build expression."; exit 1; } - sed -i -e "s|libname = .*|libname = \"$libusb\"|" usb/backend/libusb1.py + sed -i -e "s|find_library=None|find_library=lambda _:\"$libusb\"|" usb/backend/libusb1.py ''; # No tests included @@ -26229,6 +26538,11 @@ in modules // { sha256 = "030qkrsj4as9anr8xfpk5n41qzg7w4yyjasb4cqislvyl1l1dvvs"; }; + postPatch = '' + substituteInPlace requirements.txt \ + --replace 'certifi==2015.11.20.1' 'certifi==2016.2.28' + ''; + propagatedBuildInputs = with self; [ pyyaml lxml_3_5 grequests flaskbabel flask requests2 gevent speaklater Babel pytz dateutil pygments_2_0 @@ -27738,14 +28052,14 @@ in modules // { ovh = buildPythonPackage rec { name = "ovh-${version}"; - version = "0.3.5"; + version = "0.4.5"; doCheck = false; #test needs packages too explicit buildInputs = with self; [ d2to1 ]; propagatedBuildInputs = with self; [ requests2 ]; src = pkgs.fetchurl { url = "mirror://pypi/o/ovh/ovh-${version}.tar.gz"; - sha256 = "1y74lrdlgbb786mwas7ynphimfi00dgr67ncjq20kdf31jg5415n"; + sha256 = "1wf2p1sbg34jpj97r3w5nx9pj6vp0mlprry3vw2xav3dv02qv2af"; }; meta = { @@ -28535,15 +28849,15 @@ in modules // { tensorflowNoGpuSupport = buildPythonPackage rec { name = "tensorflow"; - version = "0.8.0"; + version = "0.9.0"; format = "wheel"; src = pkgs.fetchurl { url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-${version}-cp27-none-linux_x86_64.whl"; - sha256 = "07lb6rknngq9bicd7z1q9caiqxlqn4fdx8q24s3rqvv9wi79szws"; + sha256 = "15v7iyry8bmp5wcc1rr4bkp80f3887rl99zqf8pys5bad4gldbkh"; }; - propagatedBuildInputs = with self; [ numpy six protobuf3_0 pkgs.swig ]; + propagatedBuildInputs = with self; [ numpy six protobuf3_0_0b2 pkgs.swig ]; preFixup = '' RPATH="${stdenv.lib.makeLibraryPath [ pkgs.gcc.cc.lib pkgs.zlib ]}" @@ -28559,6 +28873,24 @@ in modules // { }; }; + tflearn = buildPythonPackage rec { + name = "tflearn-0.2.1"; + + meta = { + description = "Deep learning library featuring a higher-level API for TensorFlow"; + homepage = "https://github.com/tflearn/tflearn"; + license = licenses.mit; + maintainers = with maintainers; [ houqp ]; + }; + + propagatedBuildInputs = with self; [ scipy h5py pillow tensorflow ]; + + src = pkgs.fetchurl { + url = "mirror://pypi/t/tflearn/${name}.tar.gz"; + sha256 = "1n884c4j35409id2bncyj5fvmmfpdqj3pk6wrv0s1znnvs0lkii0"; + }; + }; + simpleai = buildPythonPackage rec { version = "0.7.11"; name = "simpleai-${version}"; |