diff options
Diffstat (limited to 'pkgs/applications/science')
4 files changed, 110 insertions, 0 deletions
diff --git a/pkgs/applications/science/misc/sasview/default.nix b/pkgs/applications/science/misc/sasview/default.nix new file mode 100644 index 000000000000..d0a4f74924c5 --- /dev/null +++ b/pkgs/applications/science/misc/sasview/default.nix @@ -0,0 +1,60 @@ +{lib, fetchgit, gcc, python}: + +let + xhtml2pdf = import ./xhtml2pdf.nix { inherit lib; + fetchPypi = python.pkgs.fetchPypi; + buildPythonPackage = python.pkgs.buildPythonPackage; + html5lib = python.pkgs.html5lib; + httplib2 = python.pkgs.httplib2; + nose = python.pkgs.nose; + pillow = python.pkgs.pillow; + pypdf2 = python.pkgs.pypdf2; + reportlab = python.pkgs.reportlab; +}; + +in + +python.pkgs.buildPythonApplication rec { + pname = "sasview"; + version = "4.1.2"; + + buildInputs = with python.pkgs; [ + pytest + unittest-xml-reporting]; + + propagatedBuildInputs = with python.pkgs; [ + bumps + gcc + h5py + libxslt + lxml + matplotlib + numpy + pyparsing + periodictable + pillow + pylint + pyopencl + reportlab + sasmodels + scipy + six + sphinx + wxPython + xhtml2pdf]; + + src = fetchgit { + url = "https://github.com/SasView/sasview.git"; + rev = "v${version}"; + sha256 ="05la54wwzzlkhmj8vkr0bvzagyib6z6mgwqbddzjs5y1wd48vpcx"; + }; + + patches = [./pyparsing-fix.patch ./local_config.patch]; + + meta = { + homepage = https://www.sasview.org; + description = "Fitting and data analysis for small angle scattering data"; + maintainers = with lib.maintainers; [ rprospero ]; + license = lib.licenses.bsd3; + }; +} diff --git a/pkgs/applications/science/misc/sasview/local_config.patch b/pkgs/applications/science/misc/sasview/local_config.patch new file mode 100644 index 000000000000..91972a913bc4 --- /dev/null +++ b/pkgs/applications/science/misc/sasview/local_config.patch @@ -0,0 +1,10 @@ +--- a/src/sas/_config.py ++++ b/src/sas/_config.py +@@ -70,2 +70,2 @@ +- logger.critical("Error loading %s: %s", path, exc) +- sys.exit() ++ import sas.sasview.local_config ++ return sas.sasview.local_config +-- +2.15.0 + diff --git a/pkgs/applications/science/misc/sasview/pyparsing-fix.patch b/pkgs/applications/science/misc/sasview/pyparsing-fix.patch new file mode 100644 index 000000000000..7729292cb344 --- /dev/null +++ b/pkgs/applications/science/misc/sasview/pyparsing-fix.patch @@ -0,0 +1,8 @@ +--- a/setup.py ++++ b/setup.py +@@ -5,1 +5,1 @@ +- 'bumps>=0.7.5.9', 'periodictable>=1.5.0', 'pyparsing<2.0.0', ++ 'bumps>=0.7.5.9', 'periodictable>=1.5.0', +-- +2.15.0 + diff --git a/pkgs/applications/science/misc/sasview/xhtml2pdf.nix b/pkgs/applications/science/misc/sasview/xhtml2pdf.nix new file mode 100644 index 000000000000..0b3d438843da --- /dev/null +++ b/pkgs/applications/science/misc/sasview/xhtml2pdf.nix @@ -0,0 +1,32 @@ +{lib, fetchPypi, buildPythonPackage, html5lib, httplib2, nose, pillow, pypdf2, reportlab}: + +let + #xhtml2pdf specifically requires version "1.0b10" of html5lib + html5 = html5lib.overrideAttrs( oldAttrs: rec{ + version = "1.0b10"; + src = oldAttrs.src.override { + inherit version; + sha256 = "1yd068a5c00wd0ajq0hqimv7fd82lhrw0w3s01vbhy9bbd6xapqd"; + }; + }); +in + +buildPythonPackage rec { + pname = "xhtml2pdf"; + version = "0.2.1"; + + buildInputs = [html5]; + propagatedBuildInputs = [httplib2 nose pillow pypdf2 reportlab html5]; + + src = fetchPypi { + inherit pname version; + sha256 = "1n9r8zdk9gc2x539fq60bhszmd421ipj8g78zmsn3njvma1az9k1"; + }; + + meta = { + description = "A pdf converter for the ReportLab Toolkit"; + homepage = https://github.com/xhtml2pdf/xhtml2pdf; + license = lib.licenses.asl20; + maintainers = with lib.maintainers; [ rprospero ]; + }; +} |