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-rw-r--r--pkgs/applications/science/biology/sortmerna/default.nix4
1 files changed, 4 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/sortmerna/default.nix b/pkgs/applications/science/biology/sortmerna/default.nix
index a529867aaa74..bfd6d20f1384 100644
--- a/pkgs/applications/science/biology/sortmerna/default.nix
+++ b/pkgs/applications/science/biology/sortmerna/default.nix
@@ -32,6 +32,10 @@ stdenv.mkDerivation rec {
     substituteInPlace src/sortmerna/CMakeLists.txt \
       --replace "target_link_libraries(sortmerna" \
         "target_link_libraries(sortmerna Threads::Threads"
+
+    # Fix gcc-13 build by adding missing <cstdint> includes:
+    #   https://github.com/sortmerna/sortmerna/issues/412
+    sed -e '1i #include <cstdint>' -i include/kseq_load.hpp
   '';
 
   meta = with lib; {