diff options
Diffstat (limited to 'nixpkgs/pkgs/development/python-modules/pot/default.nix')
-rw-r--r-- | nixpkgs/pkgs/development/python-modules/pot/default.nix | 38 |
1 files changed, 17 insertions, 21 deletions
diff --git a/nixpkgs/pkgs/development/python-modules/pot/default.nix b/nixpkgs/pkgs/development/python-modules/pot/default.nix index a6251b3ea479..90aac0fef677 100644 --- a/nixpkgs/pkgs/development/python-modules/pot/default.nix +++ b/nixpkgs/pkgs/development/python-modules/pot/default.nix @@ -1,10 +1,11 @@ { lib , autograd , buildPythonPackage +, fetchFromGitHub , cupy , cvxopt , cython -, fetchPypi +, oldest-supported-numpy , matplotlib , numpy , tensorflow @@ -20,19 +21,20 @@ buildPythonPackage rec { pname = "pot"; version = "0.9.1"; - format = "setuptools"; + pyproject = true; disabled = pythonOlder "3.6"; - src = fetchPypi { - pname = "POT"; - inherit version; - hash = "sha256-gcJTJ6ABl/8Rwf5SIc8YGtHf/mFWRBUuLhFd3d9eWRs="; + src = fetchFromGitHub { + owner = "PythonOT"; + repo = "POT"; + rev = version; + hash = "sha256-D61/dqO16VvcQx4FG1beKR4y1OQHndwCizaugNaUe4g="; }; nativeBuildInputs = [ - numpy cython + oldest-supported-numpy ]; propagatedBuildInputs = [ @@ -59,17 +61,19 @@ buildPythonPackage rec { --replace " --cov-report= --cov=ot" "" \ --replace " --durations=20" "" \ --replace " --junit-xml=junit-results.xml" "" - substituteInPlace setup.py \ - --replace '"oldest-supported-numpy", ' "" # we don't need setup.py to find the macos sdk for us sed -i '/sdk_path/d' setup.py ''; - # To prevent importing of an incomplete package from the build directory - # instead of nix store (`ot` is the top-level package name). + # need to run the tests with the built package next to the test directory preCheck = '' - rm -r ot + pushd build/lib.* + ln -s -t . "$OLDPWD/test" + ''; + + postCheck = '' + popd ''; disabledTests = [ @@ -100,15 +104,7 @@ buildPythonPackage rec { "test_emd1d_device_tf" ]; - disabledTestPaths = [ - # AttributeError: module pytest has no attribute skip_backend - "test/test_bregman.py" - "test/test_da.py" - "test/test_utils.py" - "test/test_gromov.py" - "test/test_helpers.py" - "test/test_unbalanced.py" - ] ++ lib.optionals (!enableDimensionalityReduction) [ + disabledTestPaths = lib.optionals (!enableDimensionalityReduction) [ "test/test_dr.py" ]; |