diff options
Diffstat (limited to 'nixpkgs/pkgs/applications/science/misc/cwltool/default.nix')
| -rw-r--r-- | nixpkgs/pkgs/applications/science/misc/cwltool/default.nix | 26 |
1 files changed, 19 insertions, 7 deletions
diff --git a/nixpkgs/pkgs/applications/science/misc/cwltool/default.nix b/nixpkgs/pkgs/applications/science/misc/cwltool/default.nix index 7c28f65f3bf7..fb3b26a12edf 100644 --- a/nixpkgs/pkgs/applications/science/misc/cwltool/default.nix +++ b/nixpkgs/pkgs/applications/science/misc/cwltool/default.nix @@ -7,32 +7,40 @@ python3.pkgs.buildPythonApplication rec { pname = "cwltool"; - version = "3.1.20230213100550"; - format = "setuptools"; + version = "3.1.20240112164112"; + pyproject = true; src = fetchFromGitHub { owner = "common-workflow-language"; - repo = pname; + repo = "cwltool"; rev = "refs/tags/${version}"; - hash = "sha256-BtHkIVadcccnYYX8lRqiCzO+/qFeBaZfdUuu6qrjysk="; + hash = "sha256-Y0DORypXlTDv04qh796oXPSTxCXGb7rLQ8Su+/As7Lo="; }; postPatch = '' substituteInPlace setup.py \ - --replace "ruamel.yaml >= 0.15, < 0.17.22" "ruamel.yaml" \ + --replace "ruamel.yaml >= 0.16, < 0.19" "ruamel.yaml" \ --replace "prov == 1.5.1" "prov" \ - --replace "setup_requires=PYTEST_RUNNER," "" + --replace '"schema-salad >= 8.4.20230426093816, < 9",' "" \ + --replace "PYTEST_RUNNER + " "" + substituteInPlace pyproject.toml \ + --replace "mypy==1.8.0" "mypy" \ + --replace "ruamel.yaml>=0.16.0,<0.18" "ruamel.yaml" ''; nativeBuildInputs = [ git - ]; + ] ++ (with python3.pkgs; [ + setuptools + setuptools-scm + ]); propagatedBuildInputs = with python3.pkgs; [ argcomplete bagit coloredlogs cwl-utils + mypy mypy-extensions prov psutil @@ -42,6 +50,10 @@ python3.pkgs.buildPythonApplication rec { ruamel-yaml schema-salad shellescape + spython + toml + types-psutil + types-requests typing-extensions ]; |