diff options
Diffstat (limited to 'nixpkgs/pkgs/applications/science/machine-learning/shogun/svmlight-scrubber.patch')
| -rw-r--r-- | nixpkgs/pkgs/applications/science/machine-learning/shogun/svmlight-scrubber.patch | 76 |
1 files changed, 76 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/applications/science/machine-learning/shogun/svmlight-scrubber.patch b/nixpkgs/pkgs/applications/science/machine-learning/shogun/svmlight-scrubber.patch new file mode 100644 index 000000000000..2958e6ce5dae --- /dev/null +++ b/nixpkgs/pkgs/applications/science/machine-learning/shogun/svmlight-scrubber.patch @@ -0,0 +1,76 @@ +From: Sebastián Mancilla <smancill@smancill.dev> +Subject: Update SVMlight scrubber script + +This requires previously fixing a few wrong preprocessor directives that +are supposed to fence code using SVMlight. + +- The script was too eager and removing *.light files in SVMlight format + that are used by other tests. The code reading those files doesn't use + any SVMlight code so it should be fine to keep it and run the tests. + +- The Python test *domainadaptationsvm.py was not removed because of + wrong globbing. + +- Remove a couple of examples using SVMlight that were missed. + +- The script is actually modifying (and breaking) itself because the + grep for the USE_SVMLIGHT macro is too eager again and matches itself + (and the version stored in upstream's Debian package control tarball + is broken because of it). Just fix it by grepping for preprocessor + directives only. + +- No need to fix the Transfer_includes.i file in the script with a final + %} when its preprocessor directives have been fixed. + +- The Swig files were moved to a new directory at some point but the + script was not updated accordingly. +--- + scripts/light-scrubber.sh | 16 ++++++---------- + 1 file changed, 6 insertions(+), 10 deletions(-) + +diff a/scripts/light-scrubber.sh b/scripts/light-scrubber.sh +--- a/scripts/light-scrubber.sh ++++ b/scripts/light-scrubber.sh +@@ -26,14 +26,16 @@ + # You should have received a copy of the GNU General Public License + # along with this program. If not, see <http://www.gnu.org/licenses/>. + # +-rm -rf examples/*/*/{*light*,*_domainadaptationsvm_*} \ ++rm -rf examples/*/*/{*light*.*,*domainadaptationsvm*} \ + examples/undocumented/matlab_and_octave/tests/*light* \ ++ examples/undocumented/python/serialization_string_kernels.py \ ++ examples/undocumented/python/mkl_binclass.py \ + src/shogun/classifier/svm/SVMLight.* \ + src/shogun/classifier/svm/SVMLightOneClass.* \ + src/shogun/regression/svr/SVRLight.* \ + doc/md/LICENSE_SVMlight* + +-for _file in `grep -rl USE_SVMLIGHT .` ++grep -rl '^#ifdef USE_SVMLIGHT' . | while read -r _file + do + sed -i.orig -e \ + '/\#ifdef USE_SVMLIGHT/,/\#endif \/\/USE_SVMLIGHT/c \\' ${_file} && \ +@@ -41,7 +43,7 @@ do + rm -rf ${_file}.orig + done + +-for _file in `find . -depth -name 'CMakeLists.txt'` ++find . -depth -name 'CMakeLists.txt' | while read -r _file + do + sed -i.orig -e 's!.*_sv[mr]light_.*!!g' ${_file} && \ + touch -r ${_file}.orig ${_file} && \ +@@ -56,13 +58,7 @@ do + rm -rf ${_file}.orig + done + +-_file="src/interfaces/modular/Transfer_includes.i" && \ +-cp -a ${_file} ${_file}.orig && \ +-echo '%}' >> ${_file} && \ +-touch -r ${_file}.orig ${_file} && \ +-rm -rf ${_file}.orig +- +-_file="src/interfaces/modular/Machine.i" && \ ++_file="src/interfaces/swig/Machine.i" && \ + sed -i.orig -e '/.*CSVRLight.*/d' ${_file} && \ + touch -r ${_file}.orig ${_file} && \ + rm -rf ${_file}.orig |