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-rw-r--r--nixpkgs/pkgs/applications/science/logic/cbmc/default.nix4
-rw-r--r--nixpkgs/pkgs/applications/science/logic/cvc5/default.nix6
-rw-r--r--nixpkgs/pkgs/applications/science/logic/egglog/Cargo.lock233
-rw-r--r--nixpkgs/pkgs/applications/science/logic/egglog/default.nix8
-rw-r--r--nixpkgs/pkgs/applications/science/logic/fast-downward/default.nix4
-rw-r--r--nixpkgs/pkgs/applications/science/logic/poly/default.nix4
6 files changed, 240 insertions, 19 deletions
diff --git a/nixpkgs/pkgs/applications/science/logic/cbmc/default.nix b/nixpkgs/pkgs/applications/science/logic/cbmc/default.nix
index c287a74010d5..228027d187bd 100644
--- a/nixpkgs/pkgs/applications/science/logic/cbmc/default.nix
+++ b/nixpkgs/pkgs/applications/science/logic/cbmc/default.nix
@@ -13,13 +13,13 @@
 
 stdenv.mkDerivation rec {
   pname = "cbmc";
-  version = "5.88.1";
+  version = "5.89.0";
 
   src = fetchFromGitHub {
     owner = "diffblue";
     repo = pname;
     rev = "${pname}-${version}";
-    sha256 = "sha256-bfrtYqTMU/Nib0wZjS/t0kg5sBsuQuq9GaHX4PxL7tU=";
+    sha256 = "sha256-pgZdR1X0aOCfCKAGo2h9bAIO2XTTiWL8ERgandOQj/M=";
   };
 
   nativeBuildInputs = [
diff --git a/nixpkgs/pkgs/applications/science/logic/cvc5/default.nix b/nixpkgs/pkgs/applications/science/logic/cvc5/default.nix
index 23310163f279..5357e1df5454 100644
--- a/nixpkgs/pkgs/applications/science/logic/cvc5/default.nix
+++ b/nixpkgs/pkgs/applications/science/logic/cvc5/default.nix
@@ -2,19 +2,19 @@
 
 stdenv.mkDerivation rec {
   pname = "cvc5";
-  version = "1.0.5";
+  version = "1.0.6";
 
   src = fetchFromGitHub {
     owner  = "cvc5";
     repo   = "cvc5";
     rev    = "cvc5-${version}";
-    hash  = "sha256-l+L59QLLrAEVkAZjhxICJpa+j+jr1k/7B61JlapXGRI=";
+    hash  = "sha256-pZiXAO92cwnYtaVMDFBEmk+NzDf4eKdc0eY0RltofPA=";
   };
 
   nativeBuildInputs = [ pkg-config cmake flex ];
   buildInputs = [
     cadical.dev symfpu gmp gtest libantlr3c antlr3_4 boost jdk
-    (python3.withPackages (ps: with ps; [ pyparsing toml ]))
+    (python3.withPackages (ps: with ps; [ pyparsing tomli ]))
   ];
 
   preConfigure = ''
diff --git a/nixpkgs/pkgs/applications/science/logic/egglog/Cargo.lock b/nixpkgs/pkgs/applications/science/logic/egglog/Cargo.lock
index b2d8ef8a904e..cb023f2e05c1 100644
--- a/nixpkgs/pkgs/applications/science/logic/egglog/Cargo.lock
+++ b/nixpkgs/pkgs/applications/science/logic/egglog/Cargo.lock
@@ -131,6 +131,15 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "630be753d4e58660abd17930c71b647fe46c27ea6b63cc59e1e3851406972e42"
 
 [[package]]
+name = "block-buffer"
+version = "0.10.4"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "3078c7629b62d3f0439517fa394996acacc5cbc91c5a20d8c658e77abd503a71"
+dependencies = [
+ "generic-array",
+]
+
+[[package]]
 name = "bumpalo"
 version = "3.13.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -186,7 +195,7 @@ dependencies = [
  "heck",
  "proc-macro2",
  "quote",
- "syn",
+ "syn 2.0.25",
 ]
 
 [[package]]
@@ -212,18 +221,47 @@ dependencies = [
 ]
 
 [[package]]
+name = "cpufeatures"
+version = "0.2.9"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "a17b76ff3a4162b0b27f354a0c87015ddad39d35f9c0c36607a3bdd175dde1f1"
+dependencies = [
+ "libc",
+]
+
+[[package]]
 name = "crunchy"
 version = "0.2.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "7a81dae078cea95a014a339291cec439d2f232ebe854a9d672b796c6afafa9b7"
 
 [[package]]
+name = "crypto-common"
+version = "0.1.6"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "1bfb12502f3fc46cca1bb51ac28df9d618d813cdc3d2f25b9fe775a34af26bb3"
+dependencies = [
+ "generic-array",
+ "typenum",
+]
+
+[[package]]
 name = "diff"
 version = "0.1.13"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "56254986775e3233ffa9c4d7d3faaf6d36a2c09d30b20687e9f88bc8bafc16c8"
 
 [[package]]
+name = "digest"
+version = "0.10.7"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "9ed9a281f7bc9b7576e61468ba615a66a5c8cfdff42420a70aa82701a3b1e292"
+dependencies = [
+ "block-buffer",
+ "crypto-common",
+]
+
+[[package]]
 name = "dirs-next"
 version = "2.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -245,12 +283,28 @@ dependencies = [
 ]
 
 [[package]]
+name = "dot-generator"
+version = "0.2.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "0aaac7ada45f71873ebce336491d1c1bc4a7c8042c7cea978168ad59e805b871"
+dependencies = [
+ "dot-structures",
+]
+
+[[package]]
+name = "dot-structures"
+version = "0.1.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "675e35c02a51bb4d4618cb4885b3839ce6d1787c97b664474d9208d074742e20"
+
+[[package]]
 name = "egglog"
 version = "0.1.0"
 dependencies = [
  "clap",
  "egraph-serialize",
  "env_logger",
+ "getrandom",
  "glob",
  "hashbrown 0.14.0",
  "indexmap 2.0.0",
@@ -276,8 +330,9 @@ dependencies = [
 [[package]]
 name = "egraph-serialize"
 version = "0.1.0"
-source = "git+https://github.com/egraphs-good/egraph-serialize?rev=54b1a4f1e2f2135846b084edcb495cd159839540#54b1a4f1e2f2135846b084edcb495cd159839540"
+source = "git+https://github.com/egraphs-good/egraph-serialize?rev=e406ffcec8c6e841089fd3e4f9b76c35ce448950#e406ffcec8c6e841089fd3e4f9b76c35ce448950"
 dependencies = [
+ "graphviz-rust",
  "indexmap 2.0.0",
  "once_cell",
  "ordered-float",
@@ -341,20 +396,38 @@ dependencies = [
 ]
 
 [[package]]
+name = "fastrand"
+version = "2.0.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "6999dc1837253364c2ebb0704ba97994bd874e8f195d665c50b7548f6ea92764"
+
+[[package]]
 name = "fixedbitset"
 version = "0.4.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "0ce7134b9999ecaf8bcd65542e436736ef32ddca1b3e06094cb6ec5755203b80"
 
 [[package]]
+name = "generic-array"
+version = "0.14.7"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "85649ca51fd72272d7821adaf274ad91c288277713d9c18820d8499a7ff69e9a"
+dependencies = [
+ "typenum",
+ "version_check",
+]
+
+[[package]]
 name = "getrandom"
 version = "0.2.10"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "be4136b2a15dd319360be1c07d9933517ccf0be8f16bf62a3bee4f0d618df427"
 dependencies = [
  "cfg-if 1.0.0",
+ "js-sys",
  "libc",
  "wasi",
+ "wasm-bindgen",
 ]
 
 [[package]]
@@ -364,6 +437,22 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "d2fabcfbdc87f4758337ca535fb41a6d701b65693ce38287d856d1674551ec9b"
 
 [[package]]
+name = "graphviz-rust"
+version = "0.6.6"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "27dafd1ac303e0dfb347a3861d9ac440859bab26ec2f534bbceb262ea492a1e0"
+dependencies = [
+ "dot-generator",
+ "dot-structures",
+ "into-attr",
+ "into-attr-derive",
+ "pest",
+ "pest_derive",
+ "rand",
+ "tempfile",
+]
+
+[[package]]
 name = "hashbrown"
 version = "0.12.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -434,6 +523,28 @@ dependencies = [
 ]
 
 [[package]]
+name = "into-attr"
+version = "0.1.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "18b48c537e49a709e678caec3753a7dba6854661a1eaa27675024283b3f8b376"
+dependencies = [
+ "dot-structures",
+]
+
+[[package]]
+name = "into-attr-derive"
+version = "0.2.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "ecac7c1ae6cd2c6a3a64d1061a8bdc7f52ff62c26a831a2301e54c1b5d70d5b1"
+dependencies = [
+ "dot-generator",
+ "dot-structures",
+ "into-attr",
+ "quote",
+ "syn 1.0.109",
+]
+
+[[package]]
 name = "is-terminal"
 version = "0.4.9"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -656,6 +767,50 @@ dependencies = [
 ]
 
 [[package]]
+name = "pest"
+version = "2.7.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "1acb4a4365a13f749a93f1a094a7805e5cfa0955373a9de860d962eaa3a5fe5a"
+dependencies = [
+ "thiserror",
+ "ucd-trie",
+]
+
+[[package]]
+name = "pest_derive"
+version = "2.7.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "666d00490d4ac815001da55838c500eafb0320019bbaa44444137c48b443a853"
+dependencies = [
+ "pest",
+ "pest_generator",
+]
+
+[[package]]
+name = "pest_generator"
+version = "2.7.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "68ca01446f50dbda87c1786af8770d535423fa8a53aec03b8f4e3d7eb10e0929"
+dependencies = [
+ "pest",
+ "pest_meta",
+ "proc-macro2",
+ "quote",
+ "syn 2.0.25",
+]
+
+[[package]]
+name = "pest_meta"
+version = "2.7.2"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "56af0a30af74d0445c0bf6d9d051c979b516a1a5af790d251daee76005420a48"
+dependencies = [
+ "once_cell",
+ "pest",
+ "sha2",
+]
+
+[[package]]
 name = "petgraph"
 version = "0.6.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -681,6 +836,12 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "5be167a7af36ee22fe3115051bc51f6e6c7054c9348e28deb4f49bd6f705a315"
 
 [[package]]
+name = "ppv-lite86"
+version = "0.2.17"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "5b40af805b3121feab8a3c29f04d8ad262fa8e0561883e7653e024ae4479e6de"
+
+[[package]]
 name = "precomputed-hash"
 version = "0.1.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -710,16 +871,29 @@ version = "0.8.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "34af8d1a0e25924bc5b7c43c079c942339d8f0a8b57c39049bef581b46327404"
 dependencies = [
+ "libc",
+ "rand_chacha",
  "rand_core",
  "serde",
 ]
 
 [[package]]
+name = "rand_chacha"
+version = "0.3.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "e6c10a63a0fa32252be49d21e7709d4d4baf8d231c2dbce1eaa8141b9b127d88"
+dependencies = [
+ "ppv-lite86",
+ "rand_core",
+]
+
+[[package]]
 name = "rand_core"
 version = "0.6.4"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "ec0be4795e2f6a28069bec0b5ff3e2ac9bafc99e6a9a7dc3547996c5c816922c"
 dependencies = [
+ "getrandom",
  "serde",
 ]
 
@@ -835,7 +1009,7 @@ checksum = "389894603bd18c46fa56231694f8d827779c0951a667087194cf9de94ed24682"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn",
+ "syn 2.0.25",
 ]
 
 [[package]]
@@ -851,6 +1025,17 @@ dependencies = [
 ]
 
 [[package]]
+name = "sha2"
+version = "0.10.7"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "479fb9d862239e610720565ca91403019f2f00410f1864c5aa7479b950a76ed8"
+dependencies = [
+ "cfg-if 1.0.0",
+ "cpufeatures",
+ "digest",
+]
+
+[[package]]
 name = "siphasher"
 version = "0.3.10"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -897,6 +1082,17 @@ source = "git+https://github.com/oflatt/symbolic-expressions?rev=4c0ea5ca008f972
 
 [[package]]
 name = "syn"
+version = "1.0.109"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "72b64191b275b66ffe2469e8af2c1cfe3bafa67b529ead792a6d0160888b4237"
+dependencies = [
+ "proc-macro2",
+ "quote",
+ "unicode-ident",
+]
+
+[[package]]
+name = "syn"
 version = "2.0.25"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "15e3fc8c0c74267e2df136e5e5fb656a464158aa57624053375eb9c8c6e25ae2"
@@ -907,6 +1103,19 @@ dependencies = [
 ]
 
 [[package]]
+name = "tempfile"
+version = "3.7.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "dc02fddf48964c42031a0b3fe0428320ecf3a73c401040fc0096f97794310651"
+dependencies = [
+ "cfg-if 1.0.0",
+ "fastrand",
+ "redox_syscall 0.3.5",
+ "rustix",
+ "windows-sys",
+]
+
+[[package]]
 name = "term"
 version = "0.7.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -943,7 +1152,7 @@ checksum = "463fe12d7993d3b327787537ce8dd4dfa058de32fc2b195ef3cde03dc4771e8f"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn",
+ "syn 2.0.25",
 ]
 
 [[package]]
@@ -965,6 +1174,18 @@ dependencies = [
 ]
 
 [[package]]
+name = "typenum"
+version = "1.16.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "497961ef93d974e23eb6f433eb5fe1b7930b659f06d12dec6fc44a8f554c0bba"
+
+[[package]]
+name = "ucd-trie"
+version = "0.1.6"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "ed646292ffc8188ef8ea4d1e0e0150fb15a5c2e12ad9b8fc191ae7a8a7f3c4b9"
+
+[[package]]
 name = "unicode-ident"
 version = "1.0.10"
 source = "registry+https://github.com/rust-lang/crates.io-index"
@@ -1015,7 +1236,7 @@ dependencies = [
  "once_cell",
  "proc-macro2",
  "quote",
- "syn",
+ "syn 2.0.25",
  "wasm-bindgen-shared",
 ]
 
@@ -1037,7 +1258,7 @@ checksum = "54681b18a46765f095758388f2d0cf16eb8d4169b639ab575a8f5693af210c7b"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn",
+ "syn 2.0.25",
  "wasm-bindgen-backend",
  "wasm-bindgen-shared",
 ]
diff --git a/nixpkgs/pkgs/applications/science/logic/egglog/default.nix b/nixpkgs/pkgs/applications/science/logic/egglog/default.nix
index 65dbcd5a1b43..c74594df28fd 100644
--- a/nixpkgs/pkgs/applications/science/logic/egglog/default.nix
+++ b/nixpkgs/pkgs/applications/science/logic/egglog/default.nix
@@ -5,19 +5,19 @@
 
 rustPlatform.buildRustPackage {
   pname = "egglog";
-  version = "unstable-2023-07-19";
+  version = "unstable-2023-08-19";
 
   src = fetchFromGitHub {
     owner = "egraphs-good";
     repo = "egglog";
-    rev = "9fe03ad35a2a975a2c9140a641ba91266b7a72ce";
-    hash = "sha256-9JeJJdZW8ecogReJzQrp3hFkK/pp/+pLxJMNREWuiyI=";
+    rev = "a4768b1751b72292b0e79e6e442d54ab270748fb";
+    hash = "sha256-WTdMhtdPvBtS6WAS3S4dui/8ospJ7nkeRhLce2zY8KE=";
   };
 
   cargoLock = {
     lockFile = ./Cargo.lock;
     outputHashes = {
-      "egraph-serialize-0.1.0" = "sha256-1lDaoR/1TNFW+uaf3UdfDZgXlxyAb37Ij7yky16xCG8=";
+      "egraph-serialize-0.1.0" = "sha256-sdkn7lmtmbLwAopabLWkrD6GjM3LIHseysuvwPz26G4=";
       "symbol_table-0.2.0" = "sha256-f9UclMOUig+N5L3ibBXou0pJ4S/CQqtaji7tnebVbis=";
       "symbolic_expressions-5.0.3" = "sha256-mSxnhveAItlTktQC4hM8o6TYjgtCUgkdZj7i6MR4Oeo=";
     };
diff --git a/nixpkgs/pkgs/applications/science/logic/fast-downward/default.nix b/nixpkgs/pkgs/applications/science/logic/fast-downward/default.nix
index 98db5682e7e7..a73d141f45b8 100644
--- a/nixpkgs/pkgs/applications/science/logic/fast-downward/default.nix
+++ b/nixpkgs/pkgs/applications/science/logic/fast-downward/default.nix
@@ -9,13 +9,13 @@
 
 stdenv.mkDerivation rec {
   pname = "fast-downward";
-  version = "22.12.0";
+  version = "23.06.0";
 
   src = fetchFromGitHub {
     owner = "aibasel";
     repo = "downward";
     rev = "release-${version}";
-    sha256 = "sha256-GwZ5BGzLRMgWNBaA7M2D2p9OxvdyWqm+sTwxGpcI/qY=";
+    sha256 = "sha256-yNaMyS47yxc/p5Rs/kHwD/pgjGXnHBdybYdo1GIEmA4=";
   };
 
   nativeBuildInputs = [ cmake python3.pkgs.wrapPython ];
diff --git a/nixpkgs/pkgs/applications/science/logic/poly/default.nix b/nixpkgs/pkgs/applications/science/logic/poly/default.nix
index 7eff519375f2..e54f822921ca 100644
--- a/nixpkgs/pkgs/applications/science/logic/poly/default.nix
+++ b/nixpkgs/pkgs/applications/science/logic/poly/default.nix
@@ -2,14 +2,14 @@
 
 stdenv.mkDerivation rec {
   pname = "libpoly";
-  version = "0.1.11";
+  version = "0.1.13";
 
   src = fetchFromGitHub {
     owner = "SRI-CSL";
     repo = "libpoly";
     # they've pushed to the release branch, use explicit tag
     rev = "refs/tags/v${version}";
-    sha256 = "sha256-vrYB6RQYShipZ0c0j1KcSTJR1h0rQKAAeJvODMar1GM=";
+    sha256 = "sha256-7aFz+6XJOVEA/Fmi0ywd6rZdTW8sHq8MoHqXR0Hc2o4=";
   };
 
   nativeBuildInputs = [ cmake ];