diff options
Diffstat (limited to 'nixpkgs/pkgs/applications/science/biology')
4 files changed, 7 insertions, 7 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/bedtools/default.nix b/nixpkgs/pkgs/applications/science/biology/bedtools/default.nix index 92cb420139df..76780298120e 100644 --- a/nixpkgs/pkgs/applications/science/biology/bedtools/default.nix +++ b/nixpkgs/pkgs/applications/science/biology/bedtools/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { pname = "bedtools"; - version = "2.31.0"; + version = "2.31.1"; src = fetchFromGitHub { owner = "arq5x"; repo = "bedtools2"; rev = "v${version}"; - sha256 = "sha256-LBD3z0+zGbQJ67oyPRFPgbiMY9EP17vSk1EKz3DrkEc="; + sha256 = "sha256-rrk+FSv1bGL0D1lrIOsQu2AT7cw2T4lkDiCnzil5fpg="; }; strictDeps = true; diff --git a/nixpkgs/pkgs/applications/science/biology/last/default.nix b/nixpkgs/pkgs/applications/science/biology/last/default.nix index 8ec08f22b7d1..7cf1560d2492 100644 --- a/nixpkgs/pkgs/applications/science/biology/last/default.nix +++ b/nixpkgs/pkgs/applications/science/biology/last/default.nix @@ -9,13 +9,13 @@ stdenv.mkDerivation rec { pname = "last"; - version = "1471"; + version = "1499"; src = fetchFromGitLab { owner = "mcfrith"; repo = "last"; rev = "refs/tags/${version}"; - hash = "sha256-HQ2C7SFfJS6TOJZUm6szhu+hMm41BnH8A7DZE5yh9fM="; + hash = "sha256-uofXtGGDloM1FxW0PYKKwfDOPlAJiapGVKwd1clFzp8="; }; nativeBuildInputs = [ diff --git a/nixpkgs/pkgs/applications/science/biology/picard-tools/default.nix b/nixpkgs/pkgs/applications/science/biology/picard-tools/default.nix index e0555055c1a4..880ea77e9d24 100644 --- a/nixpkgs/pkgs/applications/science/biology/picard-tools/default.nix +++ b/nixpkgs/pkgs/applications/science/biology/picard-tools/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { pname = "picard-tools"; - version = "3.1.0"; + version = "3.1.1"; src = fetchurl { url = "https://github.com/broadinstitute/picard/releases/download/${version}/picard.jar"; - sha256 = "sha256-6nnKYnml6BjLb6aKNHbd55nH6gP/5Somo8poxx7yhVk="; + sha256 = "sha256-FcefUf0KwAEEn53XubrB2991ncsCMKicf20fJG6LurQ="; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/nixpkgs/pkgs/applications/science/biology/quast/default.nix b/nixpkgs/pkgs/applications/science/biology/quast/default.nix index e5ee4b53089f..f280f81fae84 100644 --- a/nixpkgs/pkgs/applications/science/biology/quast/default.nix +++ b/nixpkgs/pkgs/applications/science/biology/quast/default.nix @@ -27,7 +27,7 @@ pythonPackages.buildPythonApplication rec { --replace "/bin/bash" "${bash}/bin/bash" mkdir -p "$out/${python.sitePackages}" export PYTHONPATH="$out/${python.sitePackages}:$PYTHONPATH" - ${python.pythonForBuild.interpreter} setup.py install \ + ${python.pythonOnBuildForHost.interpreter} setup.py install \ --install-lib=$out/${python.sitePackages} \ --prefix="$out" ''; |