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-rw-r--r--nixpkgs/pkgs/applications/science/biology/hh-suite/default.nix10
1 files changed, 10 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/hh-suite/default.nix b/nixpkgs/pkgs/applications/science/biology/hh-suite/default.nix
index 2e01ace7d0f1..76c6544b3430 100644
--- a/nixpkgs/pkgs/applications/science/biology/hh-suite/default.nix
+++ b/nixpkgs/pkgs/applications/science/biology/hh-suite/default.nix
@@ -1,6 +1,7 @@
 { lib
 , stdenv
 , fetchFromGitHub
+, fetchpatch
 , cmake
 , xxd
 , enableMpi ? false
@@ -18,6 +19,15 @@ stdenv.mkDerivation rec {
     hash = "sha256-kjNqJddioCZoh/cZL3YNplweIGopWIGzCYQOnKDqZmw=";
   };
 
+  patches = [
+    # Should be removable as soon as this upstream PR is merged: https://github.com/soedinglab/hh-suite/pull/357
+    (fetchpatch {
+      name = "fix-gcc13-build-issues.patch";
+      url = "https://github.com/soedinglab/hh-suite/commit/cec47cba5dcd580e668b1ee507c9282fbdc8e7d7.patch";
+      hash = "sha256-Msdmj9l8voPYXK0SSwUA6mEbFLBhTjjE/Kjp0VL4Kf4=";
+    })
+  ];
+
   nativeBuildInputs = [ cmake xxd ];
   cmakeFlags = lib.optional stdenv.hostPlatform.isx86 "-DHAVE_SSE2=1"
     ++ lib.optional stdenv.hostPlatform.isAarch "-DHAVE_ARM8=1"