diff options
Diffstat (limited to 'nixpkgs/pkgs/applications/science/biology/bcftools/default.nix')
-rw-r--r-- | nixpkgs/pkgs/applications/science/biology/bcftools/default.nix | 13 |
1 files changed, 10 insertions, 3 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/bcftools/default.nix b/nixpkgs/pkgs/applications/science/biology/bcftools/default.nix index f4e2db01fbc5..46d39c1a7ba3 100644 --- a/nixpkgs/pkgs/applications/science/biology/bcftools/default.nix +++ b/nixpkgs/pkgs/applications/science/biology/bcftools/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchurl, htslib, zlib, bzip2, lzma, curl, perl, python, bash }: +{ lib, stdenv, fetchurl, htslib, zlib, bzip2, xz, curl, perl, python3, bash }: stdenv.mkDerivation rec { pname = "bcftools"; @@ -9,12 +9,19 @@ stdenv.mkDerivation rec { sha256 = "0r508mp15pqzf8r1269kb4v5naw9zsvbwd3cz8s1yj7carsf9viw"; }; - buildInputs = [ htslib zlib bzip2 lzma curl perl python ]; + nativeBuildInputs = [ + perl + python3 + ]; + + buildInputs = [ htslib zlib bzip2 xz curl ]; + + strictDeps = true; makeFlags = [ "HSTDIR=${htslib}" "prefix=$(out)" - "CC=cc" + "CC=${stdenv.cc.targetPrefix}cc" ]; preCheck = '' |