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Diffstat (limited to 'nixpkgs/pkgs/applications/science/biology/N3/default.nix')
-rw-r--r--nixpkgs/pkgs/applications/science/biology/N3/default.nix11
1 files changed, 8 insertions, 3 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/N3/default.nix b/nixpkgs/pkgs/applications/science/biology/N3/default.nix
index 2f4aa4ce3927..e7ae8fb3cea3 100644
--- a/nixpkgs/pkgs/applications/science/biology/N3/default.nix
+++ b/nixpkgs/pkgs/applications/science/biology/N3/default.nix
@@ -1,6 +1,6 @@
 { lib, stdenv, fetchFromGitHub, cmake, makeWrapper,
   perlPackages,
-  libminc, EBTKS }:
+  libminc, ebtks }:
 
 stdenv.mkDerivation rec {
   pname = "N3";
@@ -13,11 +13,16 @@ stdenv.mkDerivation rec {
     sha256 = "06hci7gzhy8p34ggvx7gah2k9yxpwhgmq1cgw8pcd1r82g4rg6kd";
   };
 
+  postPatch = ''
+    substituteInPlace src/VolumeHist/DHistogram.cc \
+      --replace "register " ""
+  '';
+
   nativeBuildInputs = [ cmake makeWrapper ];
-  buildInputs = [ libminc EBTKS ];
+  buildInputs = [ libminc ebtks ];
   propagatedBuildInputs = with perlPackages; [ perl MNI-Perllib GetoptTabular ];
 
-  cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake" "-DEBTKS_DIR=${EBTKS}/lib/" ];
+  cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake" "-DEBTKS_DIR=${ebtks}/lib/" ];
 
   postFixup = ''
     for p in $out/bin/*; do