diff options
| -rw-r--r-- | pkgs/applications/science/biology/igv/default.nix | 11 |
1 files changed, 8 insertions, 3 deletions
diff --git a/pkgs/applications/science/biology/igv/default.nix b/pkgs/applications/science/biology/igv/default.nix index f7be7119b85d..be663628a426 100644 --- a/pkgs/applications/science/biology/igv/default.nix +++ b/pkgs/applications/science/biology/igv/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, fetchzip, jdk11, wrapGAppsHook }: +{ lib, stdenv, fetchzip, jdk17, testers, wrapGAppsHook, igv }: stdenv.mkDerivation rec { pname = "igv"; @@ -13,10 +13,10 @@ stdenv.mkDerivation rec { cp -Rv * $out/share/ sed -i "s#prefix=.*#prefix=$out/share#g" $out/share/igv.sh - sed -i 's#java#${jdk11}/bin/java#g' $out/share/igv.sh + sed -i 's#java#${jdk17}/bin/java#g' $out/share/igv.sh sed -i "s#prefix=.*#prefix=$out/share#g" $out/share/igvtools - sed -i 's#java#${jdk11}/bin/java#g' $out/share/igvtools + sed -i 's#java#${jdk17}/bin/java#g' $out/share/igvtools ln -s $out/share/igv.sh $out/bin/igv ln -s $out/share/igvtools $out/bin/igvtools @@ -26,6 +26,11 @@ stdenv.mkDerivation rec { ''; nativeBuildInputs = [ wrapGAppsHook ]; + passthru.tests.version = testers.testVersion { + package = igv; + }; + + meta = with lib; { homepage = "https://www.broadinstitute.org/igv/"; description = "A visualization tool for interactive exploration of genomic datasets"; |