diff options
| -rw-r--r-- | pkgs/applications/science/biology/samtools/default.nix | 19 | ||||
| -rw-r--r-- | pkgs/top-level/all-packages.nix | 2 |
2 files changed, 21 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/samtools/default.nix b/pkgs/applications/science/biology/samtools/default.nix new file mode 100644 index 000000000000..7c85513bd8e9 --- /dev/null +++ b/pkgs/applications/science/biology/samtools/default.nix @@ -0,0 +1,19 @@ +{ stdenv, fetchurl, zlib, ncurses }: + +stdenv.mkDerivation rec { + name = "samtools-${version}"; + version = "1.3"; + + src = fetchurl { + url = "https://github.com/samtools/samtools/releases/download/${version}/${name}.tar.bz2"; + sha256 = "03mnf0mhbfwhqlqfslrhfnw68s3g0fs1as354i9a584mqw1l1smy"; + }; + + buildInputs = [ zlib ncurses ]; + + meta = with stdenv.lib; { + description = "Tools (written in C using htslib) for manipulating next-generation sequencing data"; + license = licenses.mit; + homepage = http://www.htslib.org/; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 304a698df67d..c5292a150611 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -15476,6 +15476,8 @@ in plink = callPackage ../applications/science/biology/plink/default.nix { }; + samtools = callPackage ../applications/science/biology/samtools/default.nix { }; + ### SCIENCE/MATH |