diff options
| -rw-r--r-- | pkgs/applications/graphics/seg3d/default.nix | 4 | ||||
| -rw-r--r-- | pkgs/applications/science/biology/ants/default.nix | 30 | ||||
| -rw-r--r-- | pkgs/development/libraries/itk/default.nix | 7 | ||||
| -rw-r--r-- | pkgs/top-level/all-packages.nix | 2 |
4 files changed, 41 insertions, 2 deletions
diff --git a/pkgs/applications/graphics/seg3d/default.nix b/pkgs/applications/graphics/seg3d/default.nix index d645a15b02ea..e97278148f99 100644 --- a/pkgs/applications/graphics/seg3d/default.nix +++ b/pkgs/applications/graphics/seg3d/default.nix @@ -48,4 +48,8 @@ stdenv.mkDerivation { ''; buildInputs = [ cmake wxGTK itk mesa libXft libXext libXi zlib libXmu libuuid ]; + + meta = { + broken = true; + }; } diff --git a/pkgs/applications/science/biology/ants/default.nix b/pkgs/applications/science/biology/ants/default.nix new file mode 100644 index 000000000000..fa40e53aa0a5 --- /dev/null +++ b/pkgs/applications/science/biology/ants/default.nix @@ -0,0 +1,30 @@ +{ stdenv, fetchFromGitHub, cmake, itk, vtk }: + +stdenv.mkDerivation rec { + _name = "ANTs"; + _version = "2.1.0"; + name = "${_name}-${_version}"; + + src = fetchFromGitHub { + owner = "stnava"; + repo = "ANTs"; + rev = "4e02aa76621698e3513330dd9e863e22917e14b7"; + sha256 = "0gyys1lf69bl3569cskxc8r5llwcr0dsyzvlby5skhfpsyw0dh8r"; + }; + + nativeBuildInputs = [ cmake ]; + buildInputs = [ itk vtk ]; + + cmakeFlags = [ "-DANTS_SUPERBUILD=FALSE" "-DUSE_VTK=TRUE" ]; + + checkPhase = "ctest"; + doCheck = false; + + meta = with stdenv.lib; { + homepage = https://github.com/stnava/ANTs; + description = "Advanced normalization toolkit for medical image registration and other processing"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.unix; + license = licenses.bsd3; + }; +} diff --git a/pkgs/development/libraries/itk/default.nix b/pkgs/development/libraries/itk/default.nix index fab14e5d8b3c..7e3220d8a37c 100644 --- a/pkgs/development/libraries/itk/default.nix +++ b/pkgs/development/libraries/itk/default.nix @@ -1,4 +1,4 @@ -{stdenv, fetchurl, cmake, libX11, libuuid, xz}: +{ stdenv, fetchurl, cmake, libX11, libuuid, xz, vtk }: stdenv.mkDerivation rec { name = "itk-4.10.0"; @@ -12,12 +12,15 @@ stdenv.mkDerivation rec { "-DBUILD_TESTING=OFF" "-DBUILD_EXAMPLES=OFF" "-DBUILD_SHARED_LIBS=ON" + "-DModule_ITKIOMINC=ON" + "-DModule_ITKVtkGlue=ON" + "-DModule_ITKReview=ON" ]; enableParallelBuilding = true; nativeBuildInputs = [ cmake xz ]; - buildInputs = [ libX11 libuuid ]; + buildInputs = [ libX11 libuuid vtk ]; meta = { description = "Insight Segmentation and Registration Toolkit"; diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 9c749a0fccce..50c08ff66508 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -17063,6 +17063,8 @@ with pkgs; alliance = callPackage ../applications/science/electronics/alliance { }; + ants = callPackage ../applications/science/biology/ants { }; + archimedes = callPackage ../applications/science/electronics/archimedes { stdenv = overrideCC stdenv gcc49; }; |