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authorChris Ostrouchov <chris.ostrouchov@gmail.com>2019-07-12 20:35:32 -0400
committerFrederik Rietdijk <freddyrietdijk@fridh.nl>2019-07-14 09:55:11 +0200
commite773b424e21946c3310431b01292d5ded031f1f8 (patch)
tree5423a7f4635831189ba96b335d9f7245272028df /pkgs
parente72d2b671678edf1a96cf46746a285a5e8a96544 (diff)
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pythonPackages.scikit-tda: init at 0.0.4
Diffstat (limited to 'pkgs')
-rw-r--r--pkgs/development/python-modules/scikit-tda/default.nix64
-rw-r--r--pkgs/top-level/python-packages.nix2
2 files changed, 66 insertions, 0 deletions
diff --git a/pkgs/development/python-modules/scikit-tda/default.nix b/pkgs/development/python-modules/scikit-tda/default.nix
new file mode 100644
index 000000000000..0c33f7a0dabd
--- /dev/null
+++ b/pkgs/development/python-modules/scikit-tda/default.nix
@@ -0,0 +1,64 @@
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, numpy
+, scipy
+, scikitlearn
+, matplotlib
+, numba
+, umap-learn
+, cython
+, ripser
+, persim
+, pillow
+, kmapper
+, tadasets
+, pytest
+, isPy27
+}:
+
+buildPythonPackage rec {
+  pname = "scikit-tda";
+  version = "0.0.4";
+  disabled = isPy27;
+
+  src = fetchFromGitHub {
+    owner = "scikit-tda";
+    repo = "scikit-tda";
+    rev = version;
+    sha256 = "0a90k6i9fkmc9gf250b4fidx2fzd2qrn025l74mjk51fvf23q13a";
+  };
+
+  propagatedBuildInputs = [
+    numpy
+    scipy
+    scikitlearn
+    matplotlib
+    numba
+    umap-learn
+    cython
+    ripser
+    persim
+    pillow
+    kmapper
+    tadasets
+  ];
+
+  checkInputs = [
+    pytest
+  ];
+
+  checkPhase = ''
+    pytest test
+  '';
+
+  # tests will be included in next release
+  doCheck = false;
+
+  meta = with lib; {
+    description = "Topological Data Analysis for humans";
+    homepage = https://github.com/scikit-tda/scikit-tda;
+    license = licenses.mit;
+    maintainers = [ maintainers.costrouc ];
+  };
+}
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index f0ae1f635996..20b7d95adb24 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -4435,6 +4435,8 @@ in {
 
   scikit-optimize = callPackage ../development/python-modules/scikit-optimize { };
 
+  scikit-tda = callPackage ../development/python-modules/scikit-tda { };
+
   scp = callPackage ../development/python-modules/scp {};
 
   seaborn = callPackage ../development/python-modules/seaborn { };