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| author | Michel Kuhlmann <michel@kuhlmanns.info> | 2015-10-12 10:02:48 +0200 |
|---|---|---|
| committer | Michel Kuhlmann <michel@kuhlmanns.info> | 2015-10-12 10:02:48 +0200 |
| commit | ec8f31d26cb3cedf8ab76765153c3c771e645806 (patch) | |
| tree | 53d8d6ec43a04b8e2f3504dc0184b9838bbbd015 /pkgs/development/r-modules | |
| parent | 3d0c064d1b047975464272921561d41d28b4a2e2 (diff) | |
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R: fix some modules with configure-shebang-error
- xml2: fix configure script - rversion, devtools: mark as unbroken dependency R-curl was fixed in 513e31185bb15a8c2b52149b1f1c2b3fe1740745
Diffstat (limited to 'pkgs/development/r-modules')
| -rw-r--r-- | pkgs/development/r-modules/default.nix | 9 |
1 files changed, 4 insertions, 5 deletions
diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index 68ed405ad7c2..0b0bf4871ac7 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -999,7 +999,6 @@ let "DESeq" # broken build "DESP" # broken build "destiny" # depends on broken package VIM-4.3.0 - "devtools" # broken build "DEXSeq" # depends on broken package Rsamtools-1.21.8 "dexus" # broken build "DFP" # broken build @@ -1573,7 +1572,6 @@ let "npIntFactRep" # depends on broken package nlopt-2.4.2 "NSM3" # broken build "nucleR" # depends on broken package Rsamtools-1.21.8 - "oai" # depends on broken package r-xml2-0.1.2 "OCplus" # broken build "OGSA" # broken build "oligoClasses" # depends on broken package affyio-1.37.0 @@ -1934,7 +1932,6 @@ let "RUVnormalize" # Build Is Broken "RUVSeq" # depends on broken package Rsamtools-1.21.8 "RVAideMemoire" # depends on broken package nlopt-2.4.2 - "rversions" # broken build "rvest" # broken build "RVFam" # depends on broken package nlopt-2.4.2 "RVideoPoker" # depends on broken package rpanel-1.1-3 @@ -2153,7 +2150,6 @@ let "XDE" # broken build "x_ent" # broken build "xergm" # depends on broken package nlopt-2.4.2 - "xml2" # broken build "xps" # build is broken "XVector" # broken build "yaqcaffy" # depends on broken package affyio-1.37.0 @@ -2177,7 +2173,10 @@ let }); xml2 = old.xml2.overrideDerivation (attrs: { - preConfigure = "export LIBXML_INCDIR=${pkgs.libxml2}/include/libxml2"; + preConfigure = '' + export LIBXML_INCDIR=${pkgs.libxml2}/include/libxml2 + patchShebangs configure + ''; }); curl = old.curl.overrideDerivation (attrs: { |