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author | Justin Bedo <cu@cua0.org> | 2017-02-15 13:54:55 +1100 |
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committer | Justin Bedo <cu@cua0.org> | 2017-02-24 15:22:12 +1100 |
commit | 4bb87272847c9d8b8ac4397511fd091d2f273fc3 (patch) | |
tree | f40e1d165d52881f8d480e3ae49189b76eb8a4ed /pkgs/development/r-modules/bioc-experiment-packages.nix | |
parent | c34a52bf5da351a13211a87ebc1a7a32ef2af6ba (diff) | |
download | nixlib-4bb87272847c9d8b8ac4397511fd091d2f273fc3.tar nixlib-4bb87272847c9d8b8ac4397511fd091d2f273fc3.tar.gz nixlib-4bb87272847c9d8b8ac4397511fd091d2f273fc3.tar.bz2 nixlib-4bb87272847c9d8b8ac4397511fd091d2f273fc3.tar.lz nixlib-4bb87272847c9d8b8ac4397511fd091d2f273fc3.tar.xz nixlib-4bb87272847c9d8b8ac4397511fd091d2f273fc3.tar.zst nixlib-4bb87272847c9d8b8ac4397511fd091d2f273fc3.zip |
R: 3.2.4 -> 3.3.2
Diffstat (limited to 'pkgs/development/r-modules/bioc-experiment-packages.nix')
-rw-r--r-- | pkgs/development/r-modules/bioc-experiment-packages.nix | 552 |
1 files changed, 294 insertions, 258 deletions
diff --git a/pkgs/development/r-modules/bioc-experiment-packages.nix b/pkgs/development/r-modules/bioc-experiment-packages.nix index 4ae4806a6836..93fc5a95482e 100644 --- a/pkgs/development/r-modules/bioc-experiment-packages.nix +++ b/pkgs/development/r-modules/bioc-experiment-packages.nix @@ -4,263 +4,299 @@ # Rscript generate-r-packages.R bioc-experiment >new && mv new bioc-experiment-packages.nix { self, derive }: -let derive2 = derive { rVersion = "3.2"; }; +let derive2 = derive { rVersion = "3.3"; }; in with self; { - ABAData = derive2 { name="ABAData"; version="1.0.0"; sha256="1p2q03c87ilwfz7gbypkfi0n3m9m3c4z6ci9b5v4pr46q4ppl7s9"; depends=[]; }; - ALL = derive2 { name="ALL"; version="1.12.0"; sha256="1k4sx1ras9g9zbx34r5nxyrik5c5jzb4b1zxf4551q5xfy97w354"; depends=[Biobase]; }; - ALLMLL = derive2 { name="ALLMLL"; version="1.10.0"; sha256="0c1ma3lzh1dvmz7h1pw0r9vvq9y0xmc1hjm0lwr3ql509lim82aw"; depends=[affy]; }; - ARRmData = derive2 { name="ARRmData"; version="1.6.0"; sha256="1bn41pmk7mfdncjnd103spfdcxrwz5jgdycb37kgq1hk36qzw3mj"; depends=[]; }; - Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.6.0"; sha256="03gb68gw3q6aig3r510h9rwlhj4g40n1dsic2iyj5cs9fmj6gfq1"; depends=[]; }; - Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.4.0"; sha256="1bzc53gcazsl3958nnq3igy4xrd693gl9gsrz48zaj47gwij2la0"; depends=[]; }; - Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.8.0"; sha256="0cm5giv12p3cx3z0ync7pgj309n4xy630y9wr70pb7n9kr0f5gjf"; depends=[]; }; - AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.8.0"; sha256="1cag2mc81qcqx8gwlg4xyvm4a6qayjajwdna8mcwki42gjdl15x4"; depends=[]; }; - Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.8.0"; sha256="0ajxf81y3w6r60gj6ybkzqn7qcqrwch1s10nd2jcv7ki4w6vw6kb"; depends=[]; }; - AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.10.0"; sha256="1xpkdllg9a86pc4fjfiv9a0n8mbiaxyz3ra40v9drwh29skkfpm2"; depends=[affy]; }; - AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.0.0"; sha256="1jz69nxilwcs9h7hj366dl20fxlblrgvplnjjr091r5jy3a43cvj"; depends=[]; }; - BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.8.0"; sha256="0vszzx44sppd0gka884fm53al9ljpjl4rrzq7li4w23ndf8sf5ak"; depends=[beadarray GEOquery limma]; }; - CCl4 = derive2 { name="CCl4"; version="1.8.0"; sha256="0wmkkvxb2k0x921djf7x08svkm6lxfy00053ba572zk9rgb1pzqf"; depends=[Biobase limma]; }; - CLL = derive2 { name="CLL"; version="1.10.0"; sha256="1r9iv4m993nz7rj6z23pclgd4c8j75d5raq2518vjkp1a4prhj4s"; depends=[affy Biobase]; }; - COHCAPanno = derive2 { name="COHCAPanno"; version="1.6.0"; sha256="0dayg8p92ma2bwjn4c342q03z1cmb8xyazr4c8y8pzddrydwaizv"; depends=[]; }; - COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.6.0"; sha256="045fh1g0m6z47q5smc2x7q3adfxs50fa3ph0k9b3qrkrzfq4dpcb"; depends=[]; }; - COSMIC_67 = derive2 { name="COSMIC.67"; version="1.6.0"; sha256="0ixjr4r3rj4q0mhv3nkvl4f9h6a4p0zhb90byri9w9jwskzm41h1"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; - CRCL18 = derive2 { name="CRCL18"; version="0.104.0"; sha256="1k3xk588a6jm4cifpaljciwfhwwgz1f7wigwlsi06mqnxic6d545"; depends=[Biobase]; }; - CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.2.0"; sha256="0whrczwqlni05iifra614mi2s9a9byj8gzi9dzh85947nxvvky67"; depends=[Cardinal]; }; - ChAMPdata = derive2 { name="ChAMPdata"; version="1.8.0"; sha256="0f8b7zf90avxl9siz4289m91yp21w4bk5hjw6rpkl2w2wvgcz6a1"; depends=[]; }; - ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.8.0"; sha256="0n3v9d4dbdwbjr01sn4gbys521wmqsnfdg2hbfs0fhp9kajrh9ya"; depends=[bigmemory]; }; - ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.8.0"; sha256="08p3n2ds4fxwbh0xp19z7p6qf7p07h87hxlcfnvsf0vzi8ifp146"; depends=[affy hexbin limma qvalue statmod]; }; - ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.6.0"; sha256="05gbp5gnqmdpc3yk1mbd7vj3phy1kjyimvndrc7ijvnmcg7dzs9m"; depends=[]; }; - CopyNumber450kData = derive2 { name="CopyNumber450kData"; version="1.6.0"; sha256="1scg0mij4rpgb4sfk7fzrd3yxryglnj94gv5dgj6k2gw1551xiyh"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; - CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.2.0"; sha256="1snbk048xigzskajjcm3ihm0cj9yb57h79ac91cmlpqkac6bvpsg"; depends=[]; }; - DLBCL = derive2 { name="DLBCL"; version="1.10.0"; sha256="0nmhm768cpfq8kzhc0x33yqdaw9zi7n0vzgaw2qb1f89dr0bwvm4"; depends=[Biobase]; }; - DMRcatedata = derive2 { name="DMRcatedata"; version="1.6.1"; sha256="1fd6wsg7v89iknwnpf0ypxwvpz5kl6dzwm74dsrn179fm2wxjqjm"; depends=[GenomicRanges]; }; - DREAM4 = derive2 { name="DREAM4"; version="1.6.0"; sha256="1plla7jzqarwcanyb2ss330y9ssmrr6ka6fa6040r1z0y64c12qj"; depends=[SummarizedExperiment]; }; - DeSousa2013 = derive2 { name="DeSousa2013"; version="1.6.0"; sha256="18yanbz9nnaxsxgnydvr55xw95aymk2l32fad3xzh2fb1lb3wmqm"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; - DmelSGI = derive2 { name="DmelSGI"; version="1.2.0"; sha256="0cxzw6fb3gwp46j3gc59ygiaghv4wi3dx2dbljbq9f5csnfwdr9y"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; - DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.8.0"; sha256="1s50gkjvsradqrjz47xlpzxrl1xad52g07ww75vyrgk0pqdczcgr"; depends=[EBImage]; }; - DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.6.0"; sha256="1n4nmcynm9g86n33x4ndgja8c1qkk940z9dgl15y47plyc4xx1mv"; depends=[]; }; - DvDdata = derive2 { name="DvDdata"; version="1.6.0"; sha256="1vzxlaa5481w70cy9ihmm2xk9hn7l4hwvi663i6fgjc1dzramvql"; depends=[]; }; - ELMER_data = derive2 { name="ELMER.data"; version="1.0.0"; sha256="19v1vy16ppz1nc9s4586qvsz70d1jq7cx5rj4ravnd6kwvnk12xr"; depends=[GenomicRanges]; }; - EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.8.0"; sha256="0dh37fdd8y2fnr0mf7c8jxizmpgd4xb51l1wyvbrc47iqb068g33"; depends=[GenomicRanges rtracklayer ShortRead]; }; - FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.6.0"; sha256="1s077sdz9szxzva3js1qcm5p64yy56bxjcxsf474k12n39ax5bx5"; depends=[]; }; - Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.6.0"; sha256="1q020k3iaf74cipyj4dz3qqi1007nnjhpgqf143axqzl9p7cy9f1"; depends=[Biobase gplots limma VennDiagram]; }; - Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.6.0"; sha256="0vwdklxshkpsv3wi69j7m1vdjl556zw6hxzak0jcnf60m4hmyxj2"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; - FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.8.0"; sha256="1g3jd0wihx2nw5hfjmpv3vgragkgx0nwh3j2f2fl2zdbkiaawf7j"; depends=[minfi]; }; - FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.6.0"; sha256="1xk67dxwmpiraidfmr1k6qqbfi1fnpzsr35rn4khiwh6frsyvw0d"; depends=[minfi]; }; - FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.6.0"; sha256="15f3b6p5gr25pfrnzsd90w9dnajryia66scpd4jfrws8jagccszq"; depends=[IRanges rtracklayer]; }; - GGdata = derive2 { name="GGdata"; version="1.8.0"; sha256="1r2kshwi8iajk0rwzkccdw389ffvkzivg82f4bri3xw0sq57fm50"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; }; - GSBenchMark = derive2 { name="GSBenchMark"; version="0.104.0"; sha256="133myyzjs6ybj0p7vmrz6xbrc21xid50351pyrd2hm8xrry8h7sa"; depends=[]; }; - GSVAdata = derive2 { name="GSVAdata"; version="1.6.0"; sha256="1aldm4mjzdfwnfplrr0nd115w9s877xq1glm1lv60y7dbcki0ghd"; depends=[Biobase GSEABase hgu95a_db]; }; - GWASdata = derive2 { name="GWASdata"; version="1.8.0"; sha256="1spphp552kajq80q630bwq9ynjfb0abl97fhkfgqi312xiyz8hs8"; depends=[GWASTools]; }; - HD2013SGI = derive2 { name="HD2013SGI"; version="1.10.0"; sha256="004d5j2pfrjll68qdswpla81vl6n91vq3jq5rqpc4dwsbgxwaziy"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; - HEEBOdata = derive2 { name="HEEBOdata"; version="1.8.0"; sha256="04s7jdlhls5rzyaczdar8qzln008c97fh5a51mysxw8d53cj2qd9"; depends=[]; }; - HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.10.0"; sha256="0smdnfvv8gmccxa648lh5smz2cb157bsh823kcwbb49hlm3m1mp9"; depends=[]; }; - HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="0.104.0"; sha256="0d3vigzcrdx0jk9bb27xn7zkz61jgfwsljw0xgsncq1r34v3jrmm"; depends=[]; }; - HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="0.104.0"; sha256="1l5xlfjlg619acc8sr8c3mm89cyqnkaicscmjbz6iir2zvprx0qm"; depends=[]; }; - HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.6.0"; sha256="04a9mqs7xfvyk8604g936hrgpfrq26xhi717caf32jh8hl2aaq82"; depends=[]; }; - Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.6.0"; sha256="1pqahziip8rxmnx2vpylxlfj7g21f051d13f7if4p5wgdkyy1n96"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; - ITALICSData = derive2 { name="ITALICSData"; version="2.8.0"; sha256="042axcyf4g5m5b7yl97x36n69jr3rhir3bxghpxw0xc6cbxq047g"; depends=[]; }; - Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.6.0"; sha256="10a082khw646qsqalijks35x7if997181phqw66p2gg9iy2pq0w3"; depends=[]; }; - IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.8.0"; sha256="1p6wh8y51jnz61akk5n03aklph4gh5xbkzy30mnk2gassfgd7psp"; depends=[]; }; - Iyer517 = derive2 { name="Iyer517"; version="1.12.0"; sha256="193q80789jd4afgij6pzw86pccwfg1hyyr88yc5vmvh922g94iw0"; depends=[Biobase]; }; - JASPAR2014 = derive2 { name="JASPAR2014"; version="1.6.0"; sha256="17xnxqbwv073qsyimhrsssc32xcsi2v3kh4s2qzy8is3snv560ff"; depends=[Biostrings]; }; - KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="0.104.0"; sha256="125bhkzjva7xw5zys3ahqr0qig67yms1w37zh86bcf7x2wm88ky2"; depends=[Biobase BiocGenerics]; }; - KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.8.0"; sha256="05hzmszj7dpyb6ahkxic7ykxvc57zvdfv844yss4m0a217mymglz"; depends=[Biobase BiocGenerics]; }; - LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.8.0"; sha256="0884yzyn79sfbr4wbv8vjq5ivvvk21l1r273w2sqbqay41kakrkj"; depends=[IRanges KernSmooth]; }; - ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.2.0"; sha256="12ycbz6iiq0byfvc3f3y9vfafqpskys3wycmjsiym2xscmvhqdnw"; depends=[methylPipe]; }; - LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.6.0"; sha256="04srfy56sb015iprc4r634dkabvq44fhhl7i8j9q9llg1bl43q06"; depends=[]; }; - LungCancerLines = derive2 { name="LungCancerLines"; version="0.8.0"; sha256="18alyl6hlcnx5qwakssfwqkl2aigjmcbrvxax3k9h1pvi3hwp2vf"; depends=[Rsamtools]; }; - MAQCsubset = derive2 { name="MAQCsubset"; version="1.8.0"; sha256="0dz9qnnnri2zx8iy1hshyssmq4ry16194n5gbq7j7db9c56i5ymb"; depends=[affy Biobase lumi]; }; - MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.8.0"; sha256="0kp9p51v0c3025d74gx64qpyxhgc0rrdp5li0x2jvihyjgd1wz4r"; depends=[affy Biobase]; }; - MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.8.0"; sha256="0a9mihv039f45n6h8isc834nmckcxhailah5lqmgca6lz7hclnpf"; depends=[Biobase lumi]; }; - MEALData = derive2 { name="MEALData"; version="1.0.0"; sha256="19k7fppx41v3lwrbm13d9wni7z1hjaxms14aap00ffwpwzs6f0z5"; depends=[]; }; - MEDIPSData = derive2 { name="MEDIPSData"; version="1.6.0"; sha256="1jq48li4m8ha4alfhqh7aqkrd18sk4fr1qb7vrhahqhb5q7s4vg9"; depends=[]; }; - MEEBOdata = derive2 { name="MEEBOdata"; version="1.8.0"; sha256="140p9h1f3zg5dm8nqs9hqwydlw58qzs32my2d4zmzzk6g41bj5pc"; depends=[]; }; - MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.6.0"; sha256="111830m6mzc0dlvqpq4ixi1zrfkp66vhj9i3433kyp9mw2d7mnc4"; depends=[]; }; - MSBdata = derive2 { name="MSBdata"; version="0.8.0"; sha256="10yngdppq6706jmvd8i00l01mva8757aavfmz8mmvcyi5cggz200"; depends=[]; }; - MUGAExampleData = derive2 { name="MUGAExampleData"; version="0.104.0"; sha256="00j2sgljvqpimd574k1v8apbnsb7sja79alwxq2mk26y96zh76a9"; depends=[]; }; - MethylAidData = derive2 { name="MethylAidData"; version="1.2.0"; sha256="0qyvppw5p0akqkxk26b955gjn15rikxyvxmkwd4qrv4pbxbc1crp"; depends=[MethylAid]; }; - Mulder2012 = derive2 { name="Mulder2012"; version="0.10.0"; sha256="1dlk8nrvpfk4byii5yssss016yz3qc8ndldgj44p97bqs4nfnjb4"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; }; - NCIgraphData = derive2 { name="NCIgraphData"; version="1.6.0"; sha256="1mg7rw32is8zp86rgypp0m4xv9s2phhl1z7dvdcz5knmh0c15rp8"; depends=[]; }; - NGScopyData = derive2 { name="NGScopyData"; version="0.104.0"; sha256="0wrzkqs7171jq3h9pkphz0jb8zdr3qqvz6k3xylyd13mapjabx85"; depends=[]; }; - Neve2006 = derive2 { name="Neve2006"; version="0.8.0"; sha256="0k7xqri4z3jqaqblplijddbcmaz0j1pkmzqxk13nrw501fa8cirr"; depends=[annotate Biobase hgu133a_db]; }; - PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.10.0"; sha256="0bgcfpyhyx4dxfn54m3h9xi15xga6ckrjfr3yjmw73fyplz2bmlh"; depends=[affy annotate Biobase gahgu133plus2_db gahgu133plus2cdf PREDA]; }; - PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.4.0"; sha256="00jdgz26ywqff7a216snj25kdd1dw0mh8y2qjscw9rii0mwxpg52"; depends=[PWMEnrich]; }; - PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.4.0"; sha256="06mm7vp93g9jy5jxkcn2cmn8w1dq3k97aymi24hzgynnbzx4bcw2"; depends=[PWMEnrich]; }; - PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.4.0"; sha256="0ivzysswnmj338fb4nmriw3hnslg4s8mqcskibgs42c2vm5c9ak1"; depends=[PWMEnrich]; }; - PathNetData = derive2 { name="PathNetData"; version="1.6.0"; sha256="1wcwbkhr4m3y3yp8p4zqyjlf6gvidzfds967bflfmf6yfgfbfmf4"; depends=[]; }; - ProData = derive2 { name="ProData"; version="1.8.0"; sha256="1lwa3cick6v4cdmb0das24vh8jpf9c5vnw2mpsckiaqzffx32n9j"; depends=[Biobase]; }; - QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.0.0"; sha256="1iwaing44cknnx9bhfq7qq8xcw8zdhi73p111y9f9gk00g8kwkxs"; depends=[QDNAseq]; }; - QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.0.0"; sha256="1kzr1w4kixxdd4nnz9ipkwqisx4r7wqr657qaa81axvsw71mawmy"; depends=[QDNAseq]; }; - RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.6.0"; sha256="1z0dbjid7fj9zixi3nyx9cjzmxhc684wsfglkd937a248s7f402f"; depends=[RIPSeeker]; }; - RMassBankData = derive2 { name="RMassBankData"; version="1.8.0"; sha256="121dxhy7grdx0qgnyn303isrj4pvm8h6370vgd5bidz6vp4fh0h0"; depends=[]; }; - RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.8.0"; sha256="0gdphygdpkcsxagpc2ifyqwdbr3imcym3xjqqazr2lczwpdjaffh"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; }; - RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.8.0"; sha256="17pr4y3y6dpiqnsz5z4178jmvvdx75175kh3in4gk9q1wwsc7d4z"; depends=[]; }; - RRBSdata = derive2 { name="RRBSdata"; version="0.104.0"; sha256="1ln5jmwfxhjsqq51c02fa2s11kh2vmqgagllknimx32r105rg8mi"; depends=[BiSeq]; }; - RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="1.0.0"; sha256="02c9id94m6wyrfk2s6rm5kbxzr22jmjlmv2xkay9c2k0032687aw"; depends=[RTCGA]; }; - RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="1.0.0"; sha256="14b2rlka05vp1l91g37kbpff2cc9fy43wmr90xqh0ka6rp1yh9d3"; depends=[RTCGA]; }; - RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="1.0.0"; sha256="16zz3g71y0v2zbca9iiv3p09nd9rg8nh0184q30gk44spfd7chcd"; depends=[RTCGA]; }; - RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="0.104.0"; sha256="0nagj99fd99jamyhkqif10nib5d1l1v96j73psqk07205ivpgvfv"; depends=[Biobase]; }; - RforProteomics = derive2 { name="RforProteomics"; version="1.8.0"; sha256="1hf9m7fayq6ld6ps2jzwgfv1pxj5lzxlnaybgmfcyk90nsilbmgd"; depends=[Biobase BiocInstaller biocViews interactiveDisplay MSnbase R_utils rpx shiny]; }; - RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.2.1"; sha256="1lk91ma5431z9j0j7p5cvkg2bvwggddjfpxy8syd981lyjmpw2f3"; depends=[GenomicRanges]; }; - RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.2.0"; sha256="0abwn5qckc5bha73msgcf2zn4v20lbyc3c7g3ag0lj6jl6n0hrb8"; depends=[GenomicRanges]; }; - RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.2.0"; sha256="1q9dcjqwf6n5zld1wfcy0s1qjg0fgxvvxfjvxfmlialwxc0bq3wm"; depends=[GenomicRanges]; }; - RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.2.0"; sha256="0ycy0a270vn0q0psa4ypdj6vwhfmwa15046dmi17xhw73rh3409k"; depends=[GenomicRanges]; }; - RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.2.0"; sha256="0zih5n5jh0fwjyswdk7m2v0dyqxclsgd1plblgzsdmg9gk0xr99q"; depends=[GenomicRanges]; }; - RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.2.0"; sha256="0xkhdxam57zshrx3x8iyqlx15iyfnb5zjpc51fzw286xx7qkwm12"; depends=[edgeR]; }; - RnaSeqTutorial = derive2 { name="RnaSeqTutorial"; version="0.8.0"; sha256="0xqzzrgw759kh9had1iav2ffvvdbpf83f8wvpxwb3djpikaxh8s7"; depends=[easyRNASeq]; }; - SCLCBam = derive2 { name="SCLCBam"; version="1.2.0"; sha256="0l8bh4zlrqzhp0gfqzjsqyl24i17r7mg834dq66815ziq3qxk1i0"; depends=[]; }; - SNAData = derive2 { name="SNAData"; version="1.16.0"; sha256="1m84i5w4kmwlfxaa4y5l1jia0k4mv5jg1amyhakyyp5vgznc8j6d"; depends=[graph]; }; - SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.6.0"; sha256="0jbmjc6bkqzi8m6vkr9lk88497b42bqbvjcjm43im9m28y6dacnb"; depends=[]; }; - SNPhoodData = derive2 { name="SNPhoodData"; version="1.0.0"; sha256="1b784dvqahr36953km181m5fh6cp00v9yhqf2gpadgfzbxvfz2zr"; depends=[]; }; - SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.2.0"; sha256="025zx7s86yry6j80n08cxai8if8wghvfbkx711ilgs480vd32j1v"; depends=[]; }; - SomatiCAData = derive2 { name="SomatiCAData"; version="1.8.0"; sha256="0knq9122zj2mb1ivv5r2i5jzrj0xr70i7yxkv176rkp7avbvxjlg"; depends=[]; }; - SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.6.0"; sha256="0rrw0ya3hpj020wif3hhnaqprcbjyw859mn70p0ncgjrz5rwrcs9"; depends=[exomeCopy GenomicRanges IRanges stringr]; }; - SpikeIn = derive2 { name="SpikeIn"; version="1.12.0"; sha256="157a1ckrpx6n35w8c9ipv0dnx24y76bm1vpk7mkdlbc6wblw5lwx"; depends=[affy]; }; - SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.10.0"; sha256="0bmwlc4zg2pf4da2gzys5sjbm3fzr6piw7jmbb44zxm0hgzjvx4g"; depends=[affy Biobase]; }; - TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.6.0"; sha256="051iwkzynlqw5kncbkr92m4qim95h1gri0dymm1dw2b6xzni9kmr"; depends=[Rsamtools xtable]; }; - TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.6.0"; sha256="1spgsvrlw63w04197s9a6hg7vxy3q1mjwvk649bzhi7d3y6fq055"; depends=[]; }; - TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="0.104.0"; sha256="067hzawwylvh92hb6gg5wj6k4rlsmvz3n4i995g8kzxzwwirh8hp"; depends=[Biobase]; }; - TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="0.104.0"; sha256="0dbmf3q5602fbp8jqkny33rnhvsvylhz2b5lfh6gkrqv33bc7frk"; depends=[Biobase]; }; - TargetScoreData = derive2 { name="TargetScoreData"; version="1.6.0"; sha256="1lrywj4q3ama0qhrbx0ij2h79gn3syln6zrfl0cbjj1qc0gs622w"; depends=[]; }; - TargetSearchData = derive2 { name="TargetSearchData"; version="1.8.0"; sha256="1f6lkhy2ykmd625cr0yiw7x4hzs1s00cygicl9bbpfg8bq5zd600"; depends=[TargetSearch]; }; - TimerQuant = derive2 { name="TimerQuant"; version="1.0.0"; sha256="0fqw9md30q11zvqi02paas7kmwwvg882wx678yv2928cn5ba32p6"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; - WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.2.0"; sha256="0zad0d17w85pam99ib5x4a5459d3ds8rm5l8q09zsg1x5xkx387j"; depends=[]; }; - XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.8.0"; sha256="0xbnx3093xz3ifiaj3kjl3kcnl1qgbpnii7ypz5apldf8jhji15z"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; - affycompData = derive2 { name="affycompData"; version="1.8.0"; sha256="0bzbnqz0f5vbi01hv7mjc7ajdd68hql046ly7vskma0wgrmqhqxj"; depends=[affycomp Biobase]; }; - affydata = derive2 { name="affydata"; version="1.18.0"; sha256="0vcmpy73wzhgqj6fg7qqdng3x7mi1pvdj563przsb301mviyyqyh"; depends=[affy]; }; - airway = derive2 { name="airway"; version="0.104.0"; sha256="14wc32azs9zcxw6q639xpxyzq6r1ws6c5zbf9fvisp4cfmma8z7f"; depends=[SummarizedExperiment]; }; - antiProfilesData = derive2 { name="antiProfilesData"; version="1.6.0"; sha256="0j7rsxkl9wpp7hbgm8jkmc16m842839x5adnlrqikz64r292ihip"; depends=[Biobase]; }; - bcellViper = derive2 { name="bcellViper"; version="1.6.0"; sha256="027cznns57mvqphkbw3z39lywv9f3cwyrc5cc5nr8271s9cxgvzq"; depends=[Biobase]; }; - beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.8.0"; sha256="0xsz00i1rsm770fpx705bp0lhxq789i7fyrh6nxgb3dvymm6sfnl"; depends=[beadarray Biobase]; }; - beta7 = derive2 { name="beta7"; version="1.8.0"; sha256="1ifrpg46dmxmaxr9vzff837skqwdb6672m9w238lnml4y2rmvxxh"; depends=[marray]; }; - bladderbatch = derive2 { name="bladderbatch"; version="1.8.0"; sha256="0r5l091dnlh17k4a75dkwjkpq0rjwl2pkp5r4wk3qf34q6dg2lin"; depends=[Biobase]; }; - blimaTestingData = derive2 { name="blimaTestingData"; version="0.104.0"; sha256="03v192y9b07h4jlj9vjfzwpnlk7xczcqlwrpjpgand633769hanz"; depends=[]; }; - breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.8.0"; sha256="0zn7s7bppvynnch1fbd3g1hax5y0bw80bhnqwsksm2kjj6b7p4f9"; depends=[]; }; - breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.8.0"; sha256="14pk3gi3xn14vs49ay5rxn5mjpc033h5rln8646lljyng7i5j137"; depends=[]; }; - breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.8.0"; sha256="0gy90309nvwhhx8hvng4rf1nmvfkgljmvr6z2xd5j2j6l3waii2d"; depends=[]; }; - breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.8.0"; sha256="1k8l3hgnnzw3qlyb57ys81w2v9hk1rr20p0w3bcd33nrhacr2nh0"; depends=[]; }; - breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.8.0"; sha256="0w8nmly2gcvw3y628k3ckfkv19fq8vxhf15bqw8z5qq974rp2vis"; depends=[]; }; - breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.8.0"; sha256="0vx2bqh5asjjdy1jnk0n22adanmmb4s3hdxg8645y121mprrg2jp"; depends=[]; }; - bronchialIL13 = derive2 { name="bronchialIL13"; version="1.8.0"; sha256="0mbjpx0w5bqbb9vc0x7zl78m6y0gkcad1abfycjlpr7yhf3i1k76"; depends=[affy]; }; - bsseqData = derive2 { name="bsseqData"; version="0.8.0"; sha256="0rlls31yyzkisx61y0i15qgkc5ixk0xkd2ix03cv4zz1fv0iyz2x"; depends=[bsseq]; }; - cMap2data = derive2 { name="cMap2data"; version="1.6.0"; sha256="0zwzynw8i72g2zy9kfipz3rik1n7c590bxxniwxz884fafwgn5yw"; depends=[]; }; - cancerdata = derive2 { name="cancerdata"; version="1.8.0"; sha256="1cdiqx8f5d2af46mnad5zjaazxw2qh68h0hg4sj8p8xxjf2l1d3f"; depends=[Biobase]; }; - ccTutorial = derive2 { name="ccTutorial"; version="1.8.0"; sha256="0lvsl9127djdrkpk5c4n570sr06yj5x24lfbhrvy4jk8qa4g1qx3"; depends=[affy Biobase Ringo topGO]; }; - ceu1kg = derive2 { name="ceu1kg"; version="0.8.0"; sha256="1cm2myjmrn2kiwgfjpkslz0s6l8qvs8g3y0jbfckp31sd1211kkh"; depends=[Biobase GGBase GGtools]; }; - ceu1kgv = derive2 { name="ceu1kgv"; version="0.12.0"; sha256="165qp5cfs87ds7sx525fpj5cwisl4520b911l0xxmgcvhz6gjyi5"; depends=[Biobase GGBase]; }; - ceuhm3 = derive2 { name="ceuhm3"; version="0.8.0"; sha256="10plz831m2vynwn5x4kh93iwcwkn6x39q9qg25lvlrj8j3mqgjmg"; depends=[Biobase GGBase GGtools]; }; - cgdv17 = derive2 { name="cgdv17"; version="0.8.0"; sha256="0wjx4072gpsv6w1x7d5q0qya0ism5xw13zl8d1m49jhszk2kns1j"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; }; - charmData = derive2 { name="charmData"; version="1.6.0"; sha256="0qy3dcx745diza5xy6f1qipnnawqx20vp6p0piy9wvwvgalcx886"; depends=[charm pd_charm_hg18_example]; }; - cheung2010 = derive2 { name="cheung2010"; version="0.8.0"; sha256="0qrq5k8gpsvqv5vhq67lgql69x7gqsqyfrs87ih8jir1nhgyrmzy"; depends=[AnnotationDbi Biobase GenomicRanges GGtools hgfocus_db]; }; - chipenrich_data = derive2 { name="chipenrich.data"; version="1.6.0"; sha256="04v1zzn7balic5hxlxdgqxpgg0pbsyg5s0ivhn232c3qbidh480g"; depends=[BiocGenerics GenomicRanges IRanges]; }; - cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.6.0"; sha256="1ys4sxp4biqb8bgqds9y22kiiwxhbv3p32vrbj1vm9fn3isphqr8"; depends=[cnvGSA]; }; - colonCA = derive2 { name="colonCA"; version="1.12.0"; sha256="0nf4nfjymm0vw7zdi0wpcn8kc49kfangnsfajvarpwjikff2bcsl"; depends=[Biobase]; }; - curatedBladderData = derive2 { name="curatedBladderData"; version="1.6.0"; sha256="0rs2fslz39nyxs4v0zjldlascc0rnpzzisxhrnb913y72wlk7fad"; depends=[affy]; }; - curatedBreastData = derive2 { name="curatedBreastData"; version="1.2.0"; sha256="01q37mlxlh0sdnb8ilsr6s5k40awgcg0n5ggj056dcna9nfvqi74"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; - curatedCRCData = derive2 { name="curatedCRCData"; version="2.2.0"; sha256="0p4jgmg3234siglzf1klzq70vgrsnxcz4w2fw16h34m7jkrhiqas"; depends=[BiocGenerics nlme]; }; - curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.8.0"; sha256="1fdwns0srpkvzvs87zq7wq6a3a324d6l8mjxncryxdcbgjfv3fb8"; depends=[affy BiocGenerics]; }; - davidTiling = derive2 { name="davidTiling"; version="1.10.0"; sha256="06kjzkgqigfnd44yd9czccqn8nill4v3x3dfk7kmzbz7lmmrdhx1"; depends=[Biobase GO_db tilingArray]; }; - derfinderData = derive2 { name="derfinderData"; version="0.104.0"; sha256="0biqbxm3fcqxsmv3bkxb66cpv54iswpsjizh7i6qmilw20fcrdm6"; depends=[]; }; - diggitdata = derive2 { name="diggitdata"; version="1.2.0"; sha256="190ppd35dg559g557kwvd0kpl900x9jvarflhxq47p9zgg35yrvf"; depends=[Biobase viper]; }; - dressCheck = derive2 { name="dressCheck"; version="0.8.0"; sha256="03k7m4fr6ac1pfjz86sgz8ywmvxdxjxpd4rrdgix8bn88mfw9qyi"; depends=[Biobase]; }; - dsQTL = derive2 { name="dsQTL"; version="0.8.0"; sha256="0qh73b5xbrcdmp3kszykiqiha8s40r0npsajc1h0m7xh26b81d90"; depends=[Biobase GGBase SummarizedExperiment]; }; - dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.8.0"; sha256="0rssxjpjb7aqkkm6mg1s7df8kzbxiww9yfdljif9ph7s0svi4b5v"; depends=[GEOquery marray]; }; - ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.10.0"; sha256="0vv5ffk08kfqahsz9ib7144hywcqmvm30rpgff18kvqz2ri4391a"; depends=[affy ecolicdf]; }; - encoDnaseI = derive2 { name="encoDnaseI"; version="0.8.0"; sha256="1n6n5jfaqh1gr19grvxkpbs30314s524wfy6ppfqczxw00yrsvqk"; depends=[Biobase GGBase GGtools lattice]; }; - estrogen = derive2 { name="estrogen"; version="1.16.0"; sha256="0r4gb1vnq6nk97fqkhr9x7lq6jljpkmk7q95s0hwjnyavpwwi5qm"; depends=[affy]; }; - faahKO = derive2 { name="faahKO"; version="1.10.0"; sha256="0dkpzkdlpi757h6kkv02j74nxwz770l7jfmdz6hh6np0c27yrlqk"; depends=[xcms]; }; - fabiaData = derive2 { name="fabiaData"; version="1.8.0"; sha256="1syxcgmvb00a4k1l3c17rsmllsp4baxpqw85gvzlkix038bdwqcg"; depends=[Biobase]; }; - facopy_annot = derive2 { name="facopy.annot"; version="0.104.0"; sha256="139wd2w7mmrwi69h5mlf73zs3zaqr0kcjv116pd2r7b1dryla9y5"; depends=[]; }; - facsDorit = derive2 { name="facsDorit"; version="1.12.0"; sha256="0dlbjvzalixpxcxwls6wrlzz4lrmsxs23g1yvin940al9hli612d"; depends=[prada]; }; - ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.8.0"; sha256="19vf4q4nqk937gvn8ca4kvisyxw375xlj9g238xmlh1z33bqak7y"; depends=[lumi]; }; - fibroEset = derive2 { name="fibroEset"; version="1.12.0"; sha256="1brnc0vigpi711yc1yq69x39sksnqd26dzip174ih66hp0if3rsm"; depends=[Biobase]; }; - fission = derive2 { name="fission"; version="0.104.0"; sha256="0lbzl0r66q8h9x41167zhx3zdmf6wq1f7z1hxmq8inpl0ydrynnm"; depends=[SummarizedExperiment]; }; - flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.6.0"; sha256="0ngq0khy7f7w41mj89fdrrd5lpxznnxg53x6zfgc6mx0vm1q13ak"; depends=[flowCore]; }; - flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="2.6.1"; sha256="1y97xym505rpgsyi1nbsazaqwfxrkmp664pmdlfvp8a3l963bs2n"; depends=[]; }; - frmaExampleData = derive2 { name="frmaExampleData"; version="1.6.0"; sha256="172bvi6v824j82cr2y9y5zvdgzfwk4kdw0r54jqjgvp2kw4v55bx"; depends=[]; }; - gageData = derive2 { name="gageData"; version="2.8.0"; sha256="1h2gyn9nn8198qd99bdpf7r9f71l76yzzcagbg9z9qjhpc1nwllq"; depends=[]; }; - gaschYHS = derive2 { name="gaschYHS"; version="1.8.0"; sha256="0097vvw6z3ryiv11jvapih2r588ix7qdizmq5g3cc1s5dqrmaf02"; depends=[Biobase]; }; - gatingMLData = derive2 { name="gatingMLData"; version="2.10.0"; sha256="1ql5s1p4phhcc9lh3knrgnazkpxlxhvwpvxi0d978g6mjlbbprs2"; depends=[]; }; - gcspikelite = derive2 { name="gcspikelite"; version="1.8.0"; sha256="06k158hh3pyn9fw49njar3aj71f12pgkm2yaljnvlnabgv7r0a84"; depends=[]; }; - geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.6.0"; sha256="0zijh0s2dp1rf7z4rs8afdx18gqgsll090vclckf30jy3jy7d0ri"; depends=[GenomicFeatures rtracklayer]; }; - genomationData = derive2 { name="genomationData"; version="1.2.0"; sha256="08p1n2gp3csw7jvlkq5h3r64ix08n7kniq508w28nc0mms3pa4vn"; depends=[]; }; - geuvPack = derive2 { name="geuvPack"; version="1.2.0"; sha256="17wy3fkwq16kg3zcm30b06p0a6xwpjbjqrd2rz42ypw7d7danc3h"; depends=[SummarizedExperiment]; }; - geuvStore = derive2 { name="geuvStore"; version="1.2.0"; sha256="14xm3d808mzbvjliazn2rzz9l98b44h4x4s50ass2mfr470k79fs"; depends=[BatchJobs GenomicRanges gQTLBase]; }; - ggtut = derive2 { name="ggtut"; version="0.7.0"; sha256="0vpqzanzx3mwaz0dz29s5k9l0nly004sn3f5rjx7z8ww67ka4ii6"; depends=[cheung2010 ChIPpeakAnno ff GenomicFeatures GenomicRanges GGdata GGtools hmyriB36 Rsamtools SNPlocs_Hsapiens_dbSNP_20120608 snpStats]; }; - golubEsets = derive2 { name="golubEsets"; version="1.12.0"; sha256="0y861yr3b9c5rxi1x9796ka9bycpkwfpj7n10ikxkqggip02044j"; depends=[Biobase]; }; - grndata = derive2 { name="grndata"; version="1.2.0"; sha256="042cm5imcb1fzmm7cn4lyd8isq9yddrnvdmqv7gzklrpplhlcfa5"; depends=[]; }; - gskb = derive2 { name="gskb"; version="1.2.0"; sha256="0b2vd4vn1khk4cd3pdcxwbd26srk3w3zdlk864vhgha5n9wb89kb"; depends=[]; }; - h5vcData = derive2 { name="h5vcData"; version="1.104.0"; sha256="1jhr6gijva7498hm2mzi94ag0wx8qx16nf7l454v631px12b2hra"; depends=[]; }; - hapmap100khind = derive2 { name="hapmap100khind"; version="1.12.0"; sha256="19g5krckkxfnk2mbvlk2agwn2n1pwx6m343nngr07lysxjdddsz3"; depends=[]; }; - hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.12.0"; sha256="038vf5xfkn266f5w0hffdn7f8xi4h4dg2fyq1lj7b8mw3hzsbd8s"; depends=[]; }; - hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.12.0"; sha256="1xz4l3nj60z10n0ia6vi6b1sc5crkl6my0axjrlc0qq7jzxpvyf2"; depends=[]; }; - hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.12.0"; sha256="1qip3qzri1ihms528wff1y9ci6zq0j3czbcs7hqiyz57yxi4phxl"; depends=[]; }; - hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.12.0"; sha256="1xb9jv4viy1q1bvcz795j25fa9ss3xrrplz3rykbnis5h87n6lbj"; depends=[]; }; - hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.12.0"; sha256="0a3qshi8024n7bc8g9h3qivp6xzkd40xsll948jldzid49scqdmi"; depends=[]; }; - harbChIP = derive2 { name="harbChIP"; version="1.8.0"; sha256="08kr48nvrmphj7sj9nbj0mj1hyl97pp0g7qcnr6fb8vn5lvyriag"; depends=[Biobase Biostrings IRanges]; }; - healthyFlowData = derive2 { name="healthyFlowData"; version="1.8.0"; sha256="1wj48wagn93g7w5apl4jxii34wxd7dhiya965bkbjj6h2yhwykfd"; depends=[flowCore]; }; - hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.8.0"; sha256="0ccrqiw4348vg3pw0pl4bi846ax7spi0bxrs44gp4bsjp7amn1s9"; depends=[]; }; - hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.8.0"; sha256="17lrqvdmqc363jqr5chp3yp452hi5592d33hznira1ra9xjdk30c"; depends=[]; }; - hgu2beta7 = derive2 { name="hgu2beta7"; version="1.10.0"; sha256="0ylz3l54ip7rqiwlbzfnk65hhm4v5rd9mi5g1r97n9k6gyfd692d"; depends=[]; }; - hmyriB36 = derive2 { name="hmyriB36"; version="1.6.0"; sha256="033afw26ng2vc0fj3ipljmrq8vm0q5nbr7gh78i5vmpnkh4d5wgp"; depends=[Biobase GGBase]; }; - humanStemCell = derive2 { name="humanStemCell"; version="0.10.0"; sha256="18fwmsf2yh4q12ca7h78lk85rcf3a3l57v0hm72yw3zjdhhakfrp"; depends=[Biobase hgu133plus2_db]; }; - ind1KG = derive2 { name="ind1KG"; version="0.8.0"; sha256="10yiqj0c4vclblblkr0hwair1hyyrlp5z81y72vcjgv4wkfmxsbk"; depends=[chopsticks]; }; - iontreeData = derive2 { name="iontreeData"; version="1.6.0"; sha256="1bl2f2kk930bry8ibl3234s3ijszxfm0xhcqjay771xcfhf9c14q"; depends=[]; }; - kidpack = derive2 { name="kidpack"; version="1.12.0"; sha256="0zvdm8xyn7xwaf1qrlaizh1aqdwbicnm0l7kr554k651plcazjd1"; depends=[Biobase]; }; - leeBamViews = derive2 { name="leeBamViews"; version="1.6.0"; sha256="16g1nz8mxr31ww39y7aicvqrhlrxwbdvcnz6cl105md43f10h7v2"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges Rsamtools]; }; - leukemiasEset = derive2 { name="leukemiasEset"; version="1.6.0"; sha256="1jfp6j60ic07jqmmcmp2cp0ha42xk8b6jldviq5463yf232mgkg3"; depends=[Biobase]; }; - lumiBarnes = derive2 { name="lumiBarnes"; version="1.10.0"; sha256="0r189bh6ysarqicrsi2s5v3d0wpl0y3ycpa85igsx6yq2jsv1hlz"; depends=[Biobase lumi]; }; - lungExpression = derive2 { name="lungExpression"; version="0.8.0"; sha256="14k7xk8817vwf6vnvc2fjk4jv876s4da8d3fi84cz3hgh51rl7rz"; depends=[Biobase]; }; - mAPKLData = derive2 { name="mAPKLData"; version="1.2.0"; sha256="03x2yzpr6xr19k7kk52x6zlpjkfjhhfly1xsvdijrma6dc0rzg8a"; depends=[]; }; - mammaPrintData = derive2 { name="mammaPrintData"; version="1.6.0"; sha256="1xdhww79aig0a792akwh8mgzl7qagncl26kwv8fn4hw5vrjyxmyg"; depends=[]; }; - maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.14.0"; sha256="1h50zfm49rihda3agfb4ldlaaw651k82cfjranzp27h089glskns"; depends=[]; }; - metaMSdata = derive2 { name="metaMSdata"; version="1.6.0"; sha256="1qs5z3pbb6y04fk633vlps54gr6vlkvwl4qzgx4g7jxmlnm6w5sl"; depends=[]; }; - miRNATarget = derive2 { name="miRNATarget"; version="1.8.0"; sha256="1ahp2w6xcpav6virrzcb11df2wc5phhqarlwq03i2s284wx27bxa"; depends=[Biobase]; }; - miRcompData = derive2 { name="miRcompData"; version="1.0.0"; sha256="06chd7drzqnpbwnkc22mii1k3bv6dk96nl0hm1fg7hv2bc83j1sn"; depends=[]; }; - minfiData = derive2 { name="minfiData"; version="0.12.0"; sha256="10ny2i88w87zlizla2jx1bvrnhq9f245ggxdgvi6slrlp35l2s68"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; - minionSummaryData = derive2 { name="minionSummaryData"; version="1.0.0"; sha256="0zk9xfyxbdzxpz36ly1nsqrw29zmxqs71x1q3iks0p9jd60iwwrv"; depends=[]; }; - mitoODEdata = derive2 { name="mitoODEdata"; version="1.6.0"; sha256="07dpak6jdw7mz5jjnysyg82wikjxnk8z4wngfhdfzl0wxg23pbzx"; depends=[]; }; - mosaicsExample = derive2 { name="mosaicsExample"; version="1.6.0"; sha256="02lcjb38gf0kr2s7ydpzh1slh6d1b9vfgdk4fab2nb1k6g6nd6fm"; depends=[]; }; - mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.8.0"; sha256="0dxdg11shs4lj4vb9ja7i9v9xsdpw63ymhzlfq46claydmxgkcyz"; depends=[]; }; - msd16s = derive2 { name="msd16s"; version="0.104.0"; sha256="0xh438ayq6pxxwmc79z4cr9mw8ribh09b9x43jcka1nn9g6vka46"; depends=[Biobase metagenomeSeq]; }; - msdata = derive2 { name="msdata"; version="0.8.0"; sha256="0dl7q8r2bxqx130w0d3d860svdsnjwhsxq709xk3ir4zn6kdn2qz"; depends=[]; }; - mtbls2 = derive2 { name="mtbls2"; version="1.0.0"; sha256="0fqmzvxznik2abrh12q4ifq3yxk6nvzf1lx2mnw0cwqgndma0vcn"; depends=[]; }; - mvoutData = derive2 { name="mvoutData"; version="1.6.0"; sha256="0whmdrlnxcm4h03gh9xm386cjir6y86k1kzdl3z50y7ydzl0zkyy"; depends=[affy Biobase lumi]; }; - pRolocdata = derive2 { name="pRolocdata"; version="1.8.0"; sha256="0ndwz3z7jzyr6ac1b8cq6j0qfm8s28hpv42w5bsgp2vp85prqa1d"; depends=[Biobase MSnbase]; }; - parathyroidSE = derive2 { name="parathyroidSE"; version="1.8.0"; sha256="1g80lgbla7dpd1vcvsqgmwqcp71mwnsyps6qpgmyhyq8z5jxgkmb"; depends=[SummarizedExperiment]; }; - pasilla = derive2 { name="pasilla"; version="0.10.0"; sha256="1ydiywvw8afs5j109dnbiq6dp5inm2al8rivfgdfiqbi7w0a4iqz"; depends=[]; }; - pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.8.0"; sha256="0x4n9hqpfgnzpbsa7arzav027n0yyglljdaflzy0z8vvypp9skri"; depends=[]; }; - pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.6.0"; sha256="1kzl95mw08162widlycg3g1230c2dsf3cbvai1pb6sc4s1sb5m1k"; depends=[]; }; - pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.6.0"; sha256="0h6yg6glzsncq7k72vn3l8gxihs3r3kq7420c0sqbp2pljkcycn7"; depends=[]; }; - pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.6.0"; sha256="087fq848yyq5vl1sv5984qwbjk7navdx82gqwq4446035cv409x5"; depends=[]; }; - pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.8.0"; sha256="08f4chypg6hkgi7idq3709zij0xpw3k2rj8gkcyld4s141nzv115"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - pepDat = derive2 { name="pepDat"; version="0.104.0"; sha256="146wha2frjy8b9b6nkghp7aqzrilgircglpq1k0knzndnan4k4mq"; depends=[GenomicRanges]; }; - ppiData = derive2 { name="ppiData"; version="0.8.0"; sha256="09f14jlrbc9pqna1a5lhd9l32m4jhjgghhdczlc7kni75mzsb7ii"; depends=[AnnotationDbi graph]; }; - prebsdata = derive2 { name="prebsdata"; version="1.6.0"; sha256="0gfff1fafp5jyyfh71l7lvddm0xbx215hac92mwlkmksi8jz3f74"; depends=[]; }; - pumadata = derive2 { name="pumadata"; version="2.6.0"; sha256="1lw6jii68pzrbr3cgb0zsfbjflz526l3r5qrpbnavz0szjca4h5y"; depends=[affy Biobase oligo puma]; }; - rRDPData = derive2 { name="rRDPData"; version="0.104.0"; sha256="0700xlvfkgyrdgxyq5l0dlq2p3qf51jzamp28qqhs95440cyg26l"; depends=[rRDP]; }; - rcellminerData = derive2 { name="rcellminerData"; version="1.2.2"; sha256="1xaq03x8qxbczq0g880vdgria93s5bq2hn2nx5gz3b1qkkwb1sx9"; depends=[Biobase]; }; - rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.8.0"; sha256="161psq421pkdd9kzfk62633sj4cql2q0wjwzivjph9cm228238mp"; depends=[]; }; - seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.2.0"; sha256="03x8v75s6v3yyycgk6zwsh4j2mnsxndgbxmcw8q2a57q13y58bwi"; depends=[]; }; - seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.6.0"; sha256="1avgc0qm26r18pxrdm3fp2wrqzcapind4cb88d4z4v2gmp8y04sh"; depends=[]; }; - seqc = derive2 { name="seqc"; version="1.4.0"; sha256="0vkw4ly21jx1lqn6hhdi43mbq7idsxb4a21inwdv5fzm7vdkplb3"; depends=[]; }; - serumStimulation = derive2 { name="serumStimulation"; version="1.6.0"; sha256="14sncdp7zb0ddifr6bcy14nxp8h9dvy3gy354i74h86yvkwdv9s8"; depends=[]; }; - seventyGeneData = derive2 { name="seventyGeneData"; version="1.6.0"; sha256="0l9nkprrvkdi764b9l3rckd7zqv13y55m4s37ls3xp63i9yddqm9"; depends=[]; }; - shinyMethylData = derive2 { name="shinyMethylData"; version="0.104.0"; sha256="0w8r5g3925jy6pb5dm916lns9h7qgwy2vwnl87dwa5ff17rfmj81"; depends=[]; }; - simpIntLists = derive2 { name="simpIntLists"; version="1.6.0"; sha256="014sx5jca37jb97wblc47vspxx7iwi6vpzwrgjl22fvv7p0claj7"; depends=[]; }; - stemHypoxia = derive2 { name="stemHypoxia"; version="1.6.0"; sha256="0b25q1wni5yfjqxmhkjddnh2301rnx692n8n4ghv4l6sbq5x2kz1"; depends=[]; }; - stjudem = derive2 { name="stjudem"; version="1.10.0"; sha256="18k39mj374c2lfvjkvnzmm2phnisq8dxmsg0jgarzwqxc6740xak"; depends=[]; }; - synapterdata = derive2 { name="synapterdata"; version="1.8.0"; sha256="0ivs32fv6hfna124bmc5bbj1pj9jw15qays105djwidsik0q4ml2"; depends=[synapter]; }; - systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.0.1"; sha256="0zsqqsbln5isipr186af73084bn7yq6c4z7mni4pckwh63q45w2p"; depends=[BiocGenerics]; }; - tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.8.0"; sha256="1wbnxqmr40iy6hcpks7fafmlwzi6q1nc87494kkcsxcg698317dk"; depends=[]; }; - tinesath1probe = derive2 { name="tinesath1probe"; version="1.8.0"; sha256="0aynz111vj0zki74c5bp3f8rvmm7in52ww9aknfszgg6gi02a382"; depends=[AnnotationDbi]; }; - tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.8.0"; sha256="042z8g1mb5hiziqqbjngca1vi5mvgjny7fhx6q1z0nxrymg4yay9"; depends=[Biobase]; }; - waveTilingData = derive2 { name="waveTilingData"; version="1.6.0"; sha256="0xx60f6gvcqvj6m5wqh7mjcf0skbzz5w5bchcalmhgy56l7229a1"; depends=[]; }; - yeastCC = derive2 { name="yeastCC"; version="1.10.0"; sha256="07nhfambydc613smwajcv8qiwg0rc8zvjmyfcvi91nz49xr3cygq"; depends=[Biobase]; }; - yeastExpData = derive2 { name="yeastExpData"; version="0.16.0"; sha256="1lzz9kp9raihi3n5p05saz549kblx9k1hy9fwvh73l91gm2lmazx"; depends=[graph]; }; - yeastGSData = derive2 { name="yeastGSData"; version="0.8.0"; sha256="1vzfl8ykwwvjs58w5h8myrqfj67qpaf1zaf714r70pzx9zc1slpp"; depends=[]; }; - yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.6.0"; sha256="0d3ixzas7m4xdc20996di8x48z661i213rhkd4l6hqb4hdjb6mm8"; depends=[]; }; - yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.8.0"; sha256="1nv31zdy2br27qskz5dwxnpz2zgi0mx2fp8ddhbffrkww8zcha4m"; depends=[]; }; - yri1kgv = derive2 { name="yri1kgv"; version="0.12.0"; sha256="07lmji9sljscwqd96bcllwc3hqzrl8mwj9z7fc6kjaam491iz09f"; depends=[Biobase GGBase]; }; - zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="0.104.0"; sha256="11z6p4f8nmgjas085dvb2fnlsfb8qbbfh0jzx650sfkb2fgqqr6l"; depends=[]; }; + ABAData = derive2 { name="ABAData"; version="1.2.2"; sha256="0wp44a5i8qdg2jnxg1fvc9i79m6zdcr0027cp4fha11l1syj6dh7"; depends=[]; }; + ALL = derive2 { name="ALL"; version="1.14.0"; sha256="07prs6q7qahv763ldwf9msyglbs0yrxpr0l95aykvflyyzlkdj04"; depends=[Biobase]; }; + ALLMLL = derive2 { name="ALLMLL"; version="1.12.0"; sha256="1h4747m67sc7d6hif42dv62y7ffzv92rili95ajp208i7j4451jp"; depends=[affy]; }; + ARRmData = derive2 { name="ARRmData"; version="1.8.0"; sha256="0jkzvn9kg2laxng4gkgpx7x30zx542y1z0ywvidy8w7xa99d1c6q"; depends=[]; }; + Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.8.0"; sha256="08r8cr8gddbsl0xgbvm9vrdazzg874vkglvy3ji5y88nph9gli5x"; depends=[]; }; + Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.6.0"; sha256="0wn61kslpxp50fih4hrciig5hf0ydafabf6lzn8nlpamkr54gcw8"; depends=[]; }; + Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.10.0"; sha256="1qp649gli32h6xffw1sfjsfpxmm3wfn870sx6sgfnyxkyhr4fa4y"; depends=[]; }; + AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.10.0"; sha256="1id05rc0q2nlazc4ndjmd8blwzd1xhk06rwc2sv755v0amprn4iy"; depends=[]; }; + Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.10.0"; sha256="0pqm0v6frq0xjkdjbxgyrcipjkyp47r652gn20wc0y5kpkqs0pqq"; depends=[]; }; + AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.12.0"; sha256="04ih81msr17zwl00n36xx2l180d6q6q4cbrr2mdwr6ppfxq60g3w"; depends=[affy]; }; + AneuFinderData = derive2 { name="AneuFinderData"; version="1.0.2"; sha256="0n28m8x6kdkgqrzx468zrssy3a5qla294xs6mqxi5ghsppdasxwh"; depends=[]; }; + AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.2.2"; sha256="032f48jq7qm94g45lv1kabjc6362xfhr63dr0spsh17vhipbj06n"; depends=[]; }; + BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.10.0"; sha256="026fgqgb5b7s09zjb93qpvn9lashvcmw4dabqi80vmcslw1qynrm"; depends=[beadarray GEOquery limma]; }; + CCl4 = derive2 { name="CCl4"; version="1.9.0"; sha256="1byiayjf1jbqj1xfarblga5523gqnivr0m14pd1flrmx4d0z22kb"; depends=[Biobase limma]; }; + CLL = derive2 { name="CLL"; version="1.12.0"; sha256="1ni36n8cadlwybg9crnw1kq6xp7l0l8y6mwnjqlqzykxn5x16w08"; depends=[affy Biobase]; }; + COHCAPanno = derive2 { name="COHCAPanno"; version="1.8.0"; sha256="1wi4mg9q3kg0rglkz2i630y2w8p2hk35k013iav6r7k02n9pb4xz"; depends=[]; }; + CONFESSdata = derive2 { name="CONFESSdata"; version="1.0.0"; sha256="12q519wik54dyw2svviib04w0z5c884iiskk0v7qyhx9kydkmkfc"; depends=[]; }; + COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.8.0"; sha256="00zhw6iyak3z38s1xgh3mdd1kb166r0vm0s5np4xkp93pg6bcj7i"; depends=[]; }; + COSMIC_67 = derive2 { name="COSMIC.67"; version="1.8.2"; sha256="0x09csirjgsww38r339cpcg446xx4c5nfsifvfyvzdxxdfjq42xa"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; + CRCL18 = derive2 { name="CRCL18"; version="0.106.0"; sha256="1lfhb82hkv4ylgwdzpmlsk4rk66ingp3p2zd7c43w6rawald3s2y"; depends=[Biobase]; }; + CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.4.0"; sha256="042456sy3bikv66i2j6zidk9s9bjgd2hl481jy2jzcjg9jqzkrvr"; depends=[Cardinal]; }; + ChAMPdata = derive2 { name="ChAMPdata"; version="1.10.0"; sha256="1i4ifwiim97ap0n7ccyy3w0yh8bf22bm1laif0vb1y8cibj5nwnc"; depends=[BiocGenerics GenomicRanges]; }; + ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.10.0"; sha256="1v0h5k7z3hvwkf56xx42s8y1dx4bmwxcnl16q0pmfnakimvbm1bc"; depends=[bigmemory]; }; + ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.10.0"; sha256="0vyvzdr6iznp82njz72vw7c5amw7pgiswv7a3yv4iiz6ilcp1lb2"; depends=[affy hexbin limma qvalue statmod]; }; + ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.8.0"; sha256="1b8x7g8vzd6dmfpg5rih41bpz1srp0ykwkiz6fvwqxcic3wwjhyr"; depends=[]; }; + CopyNumber450kData = derive2 { name="CopyNumber450kData"; version="1.8.0"; sha256="1f7g07iks077b5wis4p960kf1smwwcqv8hbwqqkix5gan5hwy09g"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; + CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.4.0"; sha256="1z4bcakmi84jgiz1c46g2v6yqmxdzy9n02adhfzbh8jgzh2apq5h"; depends=[]; }; + DAPARdata = derive2 { name="DAPARdata"; version="1.0.1"; sha256="078dcj8cjj7iqjc5i6q1d7bi1frvix8f8hhmb4x20670fynda3pr"; depends=[knitr MSnbase]; }; + DLBCL = derive2 { name="DLBCL"; version="1.12.0"; sha256="04rg3c1mh5kl0dkm3wyxv5izm6910j6zin8lw21dbgnvnf7v4fg3"; depends=[Biobase]; }; + DMRcatedata = derive2 { name="DMRcatedata"; version="1.8.2"; sha256="0pl3wj2nvjhp84cvvh2yqdqqsa4b61wyqmihw8xg4qkh78dnizqk"; depends=[GenomicRanges]; }; + DREAM4 = derive2 { name="DREAM4"; version="1.8.0"; sha256="1qnq24lrpwrlcn3x1f54mb6j3qpa6rjcxn1r326dabryphg2j27d"; depends=[SummarizedExperiment]; }; + DeSousa2013 = derive2 { name="DeSousa2013"; version="1.8.0"; sha256="0x8is94i2svw9hlrhypkc0b9fa5jdpnr8vbk0iywdg8fp3a2yis0"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; + DmelSGI = derive2 { name="DmelSGI"; version="1.4.2"; sha256="11v1f4nh2r1p29dszwgq451l5cfhppylggg578xfn0i20dmwfrry"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; + DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.10.0"; sha256="0j22cb94h0sz17jdvfcc6ifig738qkx8rhlhyps42vjinslzh317"; depends=[EBImage]; }; + DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.8.0"; sha256="0qzm3zlsxhh3bq98wbwar1lmrdkjigxbw249l4l6fs6rkr89fjh7"; depends=[]; }; + DvDdata = derive2 { name="DvDdata"; version="1.8.0"; sha256="0mfgcwjqmpbi0bqy0xav8bd6w5pasx10xmz3sk5qx17iw873n6j7"; depends=[]; }; + EGSEAdata = derive2 { name="EGSEAdata"; version="1.0.1"; sha256="12294jrirm23sch7b84ylvsxg7njw9gj5h9spjh0s3mzp0iak3ac"; depends=[]; }; + ELMER_data = derive2 { name="ELMER.data"; version="1.2.2"; sha256="1invnncdcqxv8iz0asj9nkgxrvjannqfhgmv23w2p7hpvnhfc18h"; depends=[GenomicRanges]; }; + EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.10.0"; sha256="1i9cm0way8g856h90rcgq6xh0w3qkv4cq8ac0k7b2gpnsa342m6w"; depends=[GenomicRanges rtracklayer ShortRead]; }; + FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.8.0"; sha256="1yvk3px2dcnld9maizb9l5xd82pr7y9j652gknn20kl6d70rqz90"; depends=[]; }; + FIs = derive2 { name="FIs"; version="1.0.0"; sha256="0fd7yfzdyr7lrixaxji14012z2kqlyx5g9236r9hi5v1fcrxgi1v"; depends=[]; }; + Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.8.0"; sha256="0yk4aqi5j94m1n2d0ablmcc5czk44nyimi5wfagyb51187hvad8s"; depends=[Biobase gplots limma VennDiagram]; }; + Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.8.0"; sha256="11lfcbbmz5yk12j5yvn4y8ylf62i98h6y3b0mkd63lyswfkzknq9"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; + FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.10.0"; sha256="1i3f459rd7fnkqqpdshzxkilcm3m2mivw8hva3y7gb6734gpllyy"; depends=[minfi]; }; + FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.0.0"; sha256="0rq9b4xdvq6v1brjvn7qhin3s8jaakc4s5va87qnnr6hh41zlj2a"; depends=[minfi]; }; + FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.8.0"; sha256="13qr6a95vwbx3ilkbh2pbim6yb9hmz0f3gn2bkj3a3hgm1skbh5c"; depends=[minfi]; }; + FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.8.0"; sha256="07pdy0fpprs8ri1vrg3z97zdrifrgh9js25g2imb7f84fnzcl1gj"; depends=[IRanges rtracklayer]; }; + GGdata = derive2 { name="GGdata"; version="1.10.0"; sha256="14y0vmzhf3afz1q3ydrl2pwdn42x2j58rmyj2rbidcj1l2dqg4gd"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; }; + GSBenchMark = derive2 { name="GSBenchMark"; version="0.106.0"; sha256="028f0xfnmq5rn8z1q12rmd4wmcg4r7vncxkjbb589d5v7d7p73b0"; depends=[]; }; + GSE62944 = derive2 { name="GSE62944"; version="1.0.0"; sha256="1j9gh4glqw3ip442m4rp2i174l9ql9kbxd0slm7d9qgfkpggzyki"; depends=[Biobase GEOquery]; }; + GSVAdata = derive2 { name="GSVAdata"; version="1.8.0"; sha256="17azis177nwq34pn55mvz4clq32w2qn9m9rfbd2j99y7m0gcc63h"; depends=[Biobase GSEABase hgu95a_db]; }; + GWASdata = derive2 { name="GWASdata"; version="1.10.0"; sha256="0xl7idhril2jfas34g7nr7b6qvnglkg6q7q9xh1damk166dpb49g"; depends=[GWASTools]; }; + GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.0.2"; sha256="1rxkg8wxpkv0rlldyfa01f8fvph35gy7awpsnw58qfj92bcsmkgg"; depends=[]; }; + HD2013SGI = derive2 { name="HD2013SGI"; version="1.12.0"; sha256="0701nvh83q3r1mkzl6ywb91zhnmwshmsnl22zb2dhikbn1j4rzbc"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; + HEEBOdata = derive2 { name="HEEBOdata"; version="1.10.0"; sha256="1rpvpgirbwmyc3ybh2z7h6z6a0bw4jfcm60c1kamnvj44nk9f32j"; depends=[]; }; + HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.12.0"; sha256="073sb84gy804ipsdcrljxvizxp637zi9lxzc8zimxk91l35mcrnc"; depends=[]; }; + HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="0.106.2"; sha256="1lc0q6q2601z53fyxzfjzl4yg14pl0rz8j8jqzjjvb3c29an7wbb"; depends=[]; }; + HarmanData = derive2 { name="HarmanData"; version="1.0.2"; sha256="1yd9np9diir65cndk2n8cdfilnxycl0fhd9kzdz8fh37inrfvli2"; depends=[]; }; + HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="0.106.0"; sha256="1bh9ncz49gp25nj5cy4yr577lnzh6byrcps5aic71052xqw00a3a"; depends=[]; }; + HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.8.0"; sha256="0mmvxi6ippljm2c1h7grhlr0qacyvq63w0mnm9n2g6bjkmwzmn0w"; depends=[]; }; + Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.8.0"; sha256="0s0ynp1mc60ikhn20phw37happbdxi1gfgkikj51z0aryrf489wd"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; + IHW = derive2 { name="IHW"; version="0.99.14"; sha256="1qh81nhvqg5pfxvd6ap7rlksbqk6wb041w1ba1s36gfrjr1ff1j0"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; + IHWpaper = derive2 { name="IHWpaper"; version="1.0.2"; sha256="0whaa0gdqx5c5l8ra6yjl9dx9nkg32fs16w095djk7jn9f140211"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; + ITALICSData = derive2 { name="ITALICSData"; version="2.10.0"; sha256="1l31w7fgaizdglp8khnlzzpz1gwxmhzmpgfbkpnvl7wsdkfa20pn"; depends=[]; }; + Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.8.0"; sha256="1x8c897bj5bq9ifw4pyvq36rk6sqyqinr66hhxm0gcj0grhi8kpv"; depends=[]; }; + IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.10.0"; sha256="191a6vyd35ia7dcx7x9vcgizapnpzdyhcqygw4yhsf0z3pr5iv9b"; depends=[]; }; + Iyer517 = derive2 { name="Iyer517"; version="1.14.0"; sha256="13p736wxx77qc4dg2bxl2crf193yj5jxx9p6m5mblqbrgvnr4g5g"; depends=[Biobase]; }; + JASPAR2014 = derive2 { name="JASPAR2014"; version="1.8.0"; sha256="1wspjfij2h0x5i2lff0j24rx9v3ivp6s9plv61zrj34sbwibwwws"; depends=[Biostrings]; }; + JASPAR2016 = derive2 { name="JASPAR2016"; version="1.0.0"; sha256="0i29a9qa68zxgvgmfx0wyhnbangvbqr2mbdgqh65a56mnjk2ay2q"; depends=[]; }; + JctSeqData = derive2 { name="JctSeqData"; version="1.2.2"; sha256="17ld0vwk9dqyy6a6n386mzklx05azcwcfwbxrbm07z0d7f2fc73n"; depends=[]; }; + KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="0.106.0"; sha256="07pffi3ajklina1w35dn1dgj522djymp07dyillxyhm21g64qcn5"; depends=[Biobase BiocGenerics]; }; + KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.10.0"; sha256="0c7gdlxnwxlcfvydq93p9zklggk3cgrspshhjzzsmavm1dk917kk"; depends=[Biobase BiocGenerics]; }; + LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.10.0"; sha256="1fqhs3kmxf3hjld6hmi1grn8j0a4z3s4wxy8nhmwc36c7asmcyhk"; depends=[IRanges KernSmooth]; }; + ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.4.2"; sha256="0kcwicjx327lpnxq1lcmxy061r6cxfz8q2csrxp74dddkyvljmr2"; depends=[methylPipe]; }; + LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.8.0"; sha256="0fwkqyh0zhihpp2wn98b0fk23cmh9q2xvxidskia618p69vkyvn3"; depends=[]; }; + LungCancerLines = derive2 { name="LungCancerLines"; version="0.10.0"; sha256="0svawwn2xzgsd8a9k5ml5g8yll70nwpryfsqd98azrmy5jmnpmb4"; depends=[Rsamtools]; }; + MAQCsubset = derive2 { name="MAQCsubset"; version="1.10.0"; sha256="1spiav4m5zfzkbbig0qf6clvzi6gin690gicl6pvfvnwxw9hvc3s"; depends=[affy Biobase lumi]; }; + MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.10.0"; sha256="07c6by6j3cc2pvj59vsaphnaccks6asgdy7rap05b18v3cv0d85x"; depends=[affy Biobase]; }; + MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.10.0"; sha256="0z7n1pjrx2wglxpwv8h03knff5ddhcka9jxi7y14jpmjh7k9qsdc"; depends=[Biobase lumi]; }; + MEALData = derive2 { name="MEALData"; version="1.2.0"; sha256="075b5pm1xz7xm35lcbqghlhrb1srfkbdkm3f5h24cbq3qjdlnyyf"; depends=[]; }; + MEDIPSData = derive2 { name="MEDIPSData"; version="1.8.0"; sha256="0yvrr3h57vfxiv2g1n6hiib15i6rl5zw73lic9aaihhz8vzq3hiq"; depends=[]; }; + MEEBOdata = derive2 { name="MEEBOdata"; version="1.10.0"; sha256="1r7cr1fn2x372d2vx9rxz5dd53zc6256ii2laq53i9g558c4368q"; depends=[]; }; + MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.8.0"; sha256="04065hwj0ncczk4gv7zq9szp79xd90mp15a60rw8vayrh07cg563"; depends=[]; }; + MSBdata = derive2 { name="MSBdata"; version="0.10.2"; sha256="1g4ai2vrbl3dvk53acwsdqy47lh2i6d9fmghclfb8jxnh20ab34j"; depends=[]; }; + MUGAExampleData = derive2 { name="MUGAExampleData"; version="0.106.0"; sha256="1hsky35vancvwlsqky0d5liz5kfq6fhyqkvw243gjz4rakw090mh"; depends=[]; }; + MethylAidData = derive2 { name="MethylAidData"; version="1.4.2"; sha256="1x42fhaaazcwzbx7s47ffzcpga0dg39wyy64956fm42ygbvykzm6"; depends=[MethylAid]; }; + Mulder2012 = derive2 { name="Mulder2012"; version="0.12.0"; sha256="141ibn42qnv0dzzhbqgarzcvcbsqz4ckf0k4fpcgms23ky1js5s1"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; }; + NCIgraphData = derive2 { name="NCIgraphData"; version="1.8.0"; sha256="0v4v0z09rh31si29sm8bwjmc3lcjpqnpsx07wyir6kqv5kils7mb"; depends=[]; }; + NGScopyData = derive2 { name="NGScopyData"; version="0.106.0"; sha256="0a9kx8d0aqv526kk26060afl5mydj8xdkh3vv1r1v820niqgyd32"; depends=[]; }; + Neve2006 = derive2 { name="Neve2006"; version="0.10.0"; sha256="1z3hg18my8sv8q9x0k4kpcq75fm73id1ak30zq1rqrscdvysk2wn"; depends=[annotate Biobase hgu133a_db]; }; + PCHiCdata = derive2 { name="PCHiCdata"; version="1.0.2"; sha256="15pdm6y6gaia5yv4xg1yjmyqwhak49fzl5v9y0mb2gsn6nb2ajs0"; depends=[Chicago]; }; + PGPC = derive2 { name="PGPC"; version="1.0.2"; sha256="0q6s3km9d8sjzhbz1yxyadcnfq3gc8aav9hgp886ri7jcm5ddh14"; depends=[ChemmineR EBImage geneplotter ggplot2 gplots imageHTS limma plyr RColorBrewer reshape2 SearchTrees splots]; }; + PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.12.0"; sha256="0q4857a0i0a77ff139j57m6i5p71hg9gz24ln97hc4zrxcp3qbh6"; depends=[affy annotate Biobase gahgu133plus2_db gahgu133plus2cdf PREDA]; }; + PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.6.0"; sha256="0has8xd86qh5042c5kx63py8b2bqsxy1xmn12gr7wv0r1wlkzylh"; depends=[PWMEnrich]; }; + PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.6.0"; sha256="1l0806ihhba3rl6ck1xrb2jqx77jsl4c2ksph5a0dc8zccsdln94"; depends=[PWMEnrich]; }; + PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.6.0"; sha256="1j55797xdw1bwy0z0md4swyn87lki5y1qcnp7mcxfdvvq4371vm4"; depends=[PWMEnrich]; }; + PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.0.2"; sha256="0h867v5vrcwaibybqf8przk4d2l286bwbc0rg1863kdq63qhxpls"; depends=[]; }; + PathNetData = derive2 { name="PathNetData"; version="1.8.0"; sha256="0wxixfjdskcqpy6nr2bfjggjd40jlzq31y50k5x0ccbhkkf60lrv"; depends=[]; }; + ProData = derive2 { name="ProData"; version="1.10.0"; sha256="1fkh3arikrwzllqn83x5v71b5x0nm31fy1xr2sldln1qif583mcn"; depends=[Biobase]; }; + QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.2.0"; sha256="13d8zwgwv22nhi96yypk87m35yhf256aslxhx682awi40lacljr1"; depends=[QDNAseq]; }; + QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.2.0"; sha256="0v5j0nfy0k0jkgd2mxc7ya0bfagcrl7ck72crz3959bh70vglvdg"; depends=[QDNAseq]; }; + QUBICdata = derive2 { name="QUBICdata"; version="1.0.2"; sha256="1q99mhlk08x9y68pyjv9wjrdvg58qzvfsxg1alrilyh243zr2nsn"; depends=[]; }; + RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.8.0"; sha256="1i5mwj837ppmildrbsq38iqbmhgphbz18vin7qj03axxg29lkwxm"; depends=[RIPSeeker]; }; + RMassBankData = derive2 { name="RMassBankData"; version="1.10.0"; sha256="113x5dq02krdv3i1vlziqiwvvpnwg7mmmarsysjnjad539gklfvy"; depends=[]; }; + RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.10.0"; sha256="0b3gfhm5b4s044j78lq81jj3pq7w7ycxh466xnlxilaqyw7g0ydl"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; }; + RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.10.0"; sha256="016wrjr539an4hygb53schaypbsivnk6asrwywhjlxb0cjwszwvy"; depends=[]; }; + RRBSdata = derive2 { name="RRBSdata"; version="0.106.0"; sha256="08knas04hnhm54ya6nqhzv86q12gfjfynjqpy3d63s13r25pn4xk"; depends=[BiSeq]; }; + RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.0.2"; sha256="0yq6yig0xx0lzcqz1adb78swmy1jwb18hqp1x1xvnqf7c9jffv2a"; depends=[RTCGA]; }; + RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.0.2"; sha256="0mkwa1w6qzp1kzjg8y0vs09vq5yy0alf5v56cg64qg83yjb2153l"; depends=[RTCGA]; }; + RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.0.2"; sha256="0h95prind9ydyc2yj9m5ay6m7jx8fi3ay42j37px3gb0l4zmb1ph"; depends=[RTCGA]; }; + RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.2.2"; sha256="0dyr95s50cgw5xczczlaiba1hbc6x4gn03bq3zffcss3kwwzrhqy"; depends=[RTCGA]; }; + RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.0.2"; sha256="031g8pllcyyn7ayd2qy3yyq3ny39snnk86r6dy44n53a7wixvaap"; depends=[RTCGA]; }; + RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.0.2"; sha256="1nzyl6ny4vvgpxy891icy6smwi24li67k4nwzm7vwkbxq25lkgvy"; depends=[RTCGA]; }; + RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.0.2"; sha256="16yqlr2ml4hg6kz5740nxl10jkgs4d3mvm4gj2lb8qg3mji0xw77"; depends=[RTCGA]; }; + RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.2.2"; sha256="0mdj5aqxrhpwcxp2i6m9xxp808v73b3gr59ymnfsvh8pyf6929p8"; depends=[RTCGA]; }; + RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.2.2"; sha256="1wsvyrs738qz55x41byhsqrnxp3w18qibxwmmsymkgx065rlnn7p"; depends=[RTCGA]; }; + RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="0.106.0"; sha256="065vc1dhka15zzlpl84j4y619wifn7gh31i3yjqds0bgkzj5ppz8"; depends=[Biobase]; }; + RforProteomics = derive2 { name="RforProteomics"; version="1.10.2"; sha256="07snpj844hbr1g9ciq06s75w6pcjr4j70ssg85wr3igas1zmkz85"; depends=[Biobase BiocInstaller biocViews interactiveDisplay MSnbase R_utils rpx shiny]; }; + RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.4.0"; sha256="0k3k116ncw3l8fjkilbgydpp3wwj9341f7zmm67wv3mr06s43hdl"; depends=[GenomicRanges]; }; + RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.4.0"; sha256="0jmyxbdw7jj16d9p2p5kf5bc1jgdcq4w7nfca2bdsmn7q3lyq0yp"; depends=[GenomicRanges]; }; + RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.4.0"; sha256="00rj7kab8n32hxbw5682xxzrwrc91hdq1068z9bcvb52z0bsiyb2"; depends=[GenomicRanges]; }; + RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.4.0"; sha256="1513z6xka9gx3gmykc40p0xh33i4jbpw8j4l6h0bs6h25fsarqhc"; depends=[GenomicRanges]; }; + RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.4.0"; sha256="1f16sb6mazcs184wrpwkgbz6zkbk6k79pawn7ip1rsjma9p1sgqp"; depends=[GenomicRanges]; }; + RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.4.2"; sha256="127hc0wkpjssmnwqj4zzlbv7glznsc5g3qfsmx4slzf983i3hdbi"; depends=[edgeR]; }; + RnaSeqTutorial = derive2 { name="RnaSeqTutorial"; version="0.10.0"; sha256="0ci771xdjyjxidkra0lcbpnnqghbk9ycvllpxla3lw5h608wgb4m"; depends=[easyRNASeq]; }; + SCLCBam = derive2 { name="SCLCBam"; version="1.4.0"; sha256="0jpx7m38gl38r54b0652rxvbma61gzmki28j373g3ns4f4xxf7ph"; depends=[]; }; + SNAData = derive2 { name="SNAData"; version="1.18.0"; sha256="11bvbzxcvg5s3f9cl44cpwnb2php8qkfmlvzpw829wb6k2pk5ha9"; depends=[graph]; }; + SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.8.0"; sha256="0qy6rwsggd4cyvci9ng1l8kjpcv79hhqndvv6zpwnvh7ng9f0x5d"; depends=[]; }; + SNPhoodData = derive2 { name="SNPhoodData"; version="1.2.2"; sha256="0r4kanaq96xppyhjy2hnss42ckn8mac9gwpyak64ywwvq30wl12m"; depends=[]; }; + SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.4.0"; sha256="0lwdr0zpq3m0fqwijfgnm4jky8wg5pakrlpfgdhff01i9x4dh8bb"; depends=[]; }; + Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.0.2"; sha256="0vpa4a43h39hl8jx465kbypird4bh2ry5dyz3pyrf483j2wlmwjd"; depends=[]; }; + SomatiCAData = derive2 { name="SomatiCAData"; version="1.10.0"; sha256="1f2m9rdfczlsn4nvyj5m5qhy1zg08y5ajblqc4r2r6gh8y8vpqyi"; depends=[]; }; + SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.8.2"; sha256="0kdngwd3b9vb698rpfmbirbi6wa70p3sp41z2q92fjlvv9lmv7b4"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; }; + SpikeIn = derive2 { name="SpikeIn"; version="1.14.0"; sha256="1wrfz7sl1gdqpps54k8dy2r5444jajbkg66br6pjf78s4qh555sg"; depends=[affy]; }; + SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.12.0"; sha256="0r9cknnazvp8rl7a0aynh5lpb1lq69d3s8jz84wafj2mdddr3m46"; depends=[affy Biobase]; }; + TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.8.0"; sha256="1950l0fwf23p62v0sgh0mjyisa9cnf0wjplx4x368l30jxgx8ag8"; depends=[Rsamtools xtable]; }; + TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.8.0"; sha256="18hzf0sz089dpay1c4abp1wwi680gbp1cnz32rm40fgadaxv60ga"; depends=[]; }; + TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="0.106.0"; sha256="0j87h53l2by6rx0r452s3vyf1987p23zgdybgyblwhdjgiddizc0"; depends=[Biobase]; }; + TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="0.106.0"; sha256="1207h52ccs7rv4dpp87xmsdgyl841zxrnzg4wh55v8kcqnk08ly9"; depends=[Biobase]; }; + TargetScoreData = derive2 { name="TargetScoreData"; version="1.8.0"; sha256="1mb3b14qa4b0cbzxlkn4c5rihp1niz98qdd3kmmj9w3q0fllymxa"; depends=[]; }; + TargetSearchData = derive2 { name="TargetSearchData"; version="1.10.0"; sha256="1vyphhfz6lnyh19qid7m5d1j8lmwzda89bq58r5anz2dk2m7rg2s"; depends=[TargetSearch]; }; + TimerQuant = derive2 { name="TimerQuant"; version="1.2.2"; sha256="08i0qnp7fhpg1y5xdckrwxh2mzyxrv2s44z5vs1ldr2wlx4y244p"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; + WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.4.0"; sha256="07kh15dyqhb867y93g3ymcr346l69p30sikfm30dvhq16ckrg9jm"; depends=[]; }; + XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.10.0"; sha256="08zhxkg5h1g13l3p17idzcyz34qbpr6yvvl8qzkfgnm0ipcd35dv"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; + affycompData = derive2 { name="affycompData"; version="1.10.0"; sha256="12dmv99m7iy0wrzsk9h2j8ibby0shfxlyk02kk9312rlnyf7qb6g"; depends=[affycomp Biobase]; }; + affydata = derive2 { name="affydata"; version="1.20.0"; sha256="1wg3kxvlzqwf40wrkz69szrcyv4fr0fml42qqfcw7qy1m3skp1hi"; depends=[affy]; }; + airway = derive2 { name="airway"; version="0.106.2"; sha256="1yidngcxv2sma29l5k9zpjhfbawk2wb62w7ik0gbjxw9sdacpk0v"; depends=[SummarizedExperiment]; }; + antiProfilesData = derive2 { name="antiProfilesData"; version="1.8.0"; sha256="07kccp1qhhmskpymvllz9l5a4r1ml8wzww0ik82653pibsjr5zy7"; depends=[Biobase]; }; + bcellViper = derive2 { name="bcellViper"; version="1.8.0"; sha256="05bvnx7ji27r115ih4k00pqb2zvfg9cj6hsr03yszp7cmhdjw752"; depends=[Biobase]; }; + beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.10.0"; sha256="1gvq1f95yy9x8nx5hj20c884xcl6zqhsmc39pdzhmdgclfr07p6i"; depends=[beadarray Biobase]; }; + beta7 = derive2 { name="beta7"; version="1.10.0"; sha256="1vry0dbwjvzynb9bgxr8vnpaqby6kb8am2fc230hswqmwm6yjgkq"; depends=[marray]; }; + bladderbatch = derive2 { name="bladderbatch"; version="1.10.0"; sha256="06f8gx1gmkn520ca17z5a03j9f5f4bz00ggy51ygl9zlb7ib56si"; depends=[Biobase]; }; + blimaTestingData = derive2 { name="blimaTestingData"; version="0.106.0"; sha256="1d9x37wdnhcx6q5qipf4y74pr8585wwlz7xdq7dmfcrghsgd23qi"; depends=[]; }; + breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.10.0"; sha256="1ry4issbkfk761sc1mjhg46hk7j5yb4kidvpgh9nnid807zyqrfp"; depends=[]; }; + breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.10.0"; sha256="1wml4q5m83ak1zagpjlbwy7fzap7dli0rnpjanyk3dqrl79pp77c"; depends=[]; }; + breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.10.0"; sha256="0iyb8dvz4l7rvaam2xnyvgmg4n5zak5w6jhzqyc1dy29hhy55rjv"; depends=[]; }; + breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.10.0"; sha256="04av31c737ggq268rc84z89hhfv3pqrxkjlbbwhrl2qmcc0hh9fl"; depends=[]; }; + breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.10.0"; sha256="1cdx855ai6qrzq49l57x9nl58jpixnpp97cmfzys8n7kb2dn963h"; depends=[]; }; + breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.10.0"; sha256="0q1ann7mhgxlyikb4nprzhy2mm6g8fgfbb2kyczi7sshrh6h4qba"; depends=[]; }; + bronchialIL13 = derive2 { name="bronchialIL13"; version="1.10.0"; sha256="1r6p4ysr6ahwlwi0hhla6fb8cmnmgbssbqhrizqsid1f7di77n6b"; depends=[affy]; }; + bsseqData = derive2 { name="bsseqData"; version="0.10.0"; sha256="196bbxl1p31g9kpm448642a0gx8dyng8r98gn53pxmdpp2hq5yxl"; depends=[bsseq]; }; + cMap2data = derive2 { name="cMap2data"; version="1.8.0"; sha256="0pnym9c0pipag2kr7j6b7c3dhhhav7z508avv4aj6f4wcagb4yrp"; depends=[]; }; + cancerdata = derive2 { name="cancerdata"; version="1.10.0"; sha256="0388634p3j33vz8dw5i2j2y3n9w9h2diw3qsnqcar4w7d97grd9v"; depends=[Biobase]; }; + ccTutorial = derive2 { name="ccTutorial"; version="1.10.0"; sha256="04h212d5j963xm5l1hpdb901njfrfkp1qdy12ndlrph010kpk6mv"; depends=[affy Biobase Ringo topGO]; }; + ceu1kg = derive2 { name="ceu1kg"; version="0.10.0"; sha256="05dvfjpf93cl8g1caypzk84k73z6vmam91x3rh16r1fw4i3sj2i7"; depends=[Biobase GGBase GGtools]; }; + ceu1kgv = derive2 { name="ceu1kgv"; version="0.14.0"; sha256="0ah88kr9rc6g4n7d800dxaarpliy443zpd7innbmrm02xq4yjn6g"; depends=[Biobase GGBase]; }; + ceuhm3 = derive2 { name="ceuhm3"; version="0.10.0"; sha256="07pzhj9b4b4zpcfg8fjlzh53yr6pzwnfv7m7cks55x47l8bpv1d8"; depends=[Biobase GGBase GGtools]; }; + cgdv17 = derive2 { name="cgdv17"; version="0.10.0"; sha256="0rjx8jn1m9h5p982c336bza9liyv5wymgigbr7dar91y89a0pmpg"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; }; + charmData = derive2 { name="charmData"; version="1.8.0"; sha256="0b8ka779s0p0byjn8vxbygwbr2w11g5mflgzyi4qh4dvjh84sri7"; depends=[charm pd_charm_hg18_example]; }; + cheung2010 = derive2 { name="cheung2010"; version="0.10.0"; sha256="1ibwajsyggi14vscb27kr3zg8vnqrswsiphv5cdsfnapna9n5r5k"; depends=[AnnotationDbi Biobase GenomicRanges GGtools hgfocus_db]; }; + chipenrich_data = derive2 { name="chipenrich.data"; version="1.8.0"; sha256="1nq7a4kf4nybwm9k2szccn5678agfc4zy38375f44ca8b40481x9"; depends=[BiocGenerics GenomicRanges IRanges]; }; + cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.8.0"; sha256="17kfdidwvj02kcf4pvkypmx7zhyl1dafxw1j32vzvb1rm50m770b"; depends=[cnvGSA]; }; + colonCA = derive2 { name="colonCA"; version="1.14.0"; sha256="1zsk2p0q18l2nfbjgyp7h88ci3rqavnx18vkvgzp1sd4zfc2q7m4"; depends=[Biobase]; }; + curatedBladderData = derive2 { name="curatedBladderData"; version="1.8.0"; sha256="0dvr1qzjknjaq4wicihdzdlk2scj43bx89p5vshvnx5238pc0ya7"; depends=[affy]; }; + curatedBreastData = derive2 { name="curatedBreastData"; version="1.4.0"; sha256="0nm87q0x7jp2xzmw4lc3q4xa77nkjyfjzx7xnj72d9q1ph79rnyd"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; + curatedCRCData = derive2 { name="curatedCRCData"; version="2.4.0"; sha256="0xw2fda03sfh9x8qdqvp0r5g06jawidjvw2139kgn3lkh000mffb"; depends=[BiocGenerics nlme]; }; + curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.10.0"; sha256="1wgf366krp6zv950giw1s5am9wi54zyvh5qkyn5ff85s6nshx7xf"; depends=[affy BiocGenerics]; }; + davidTiling = derive2 { name="davidTiling"; version="1.12.0"; sha256="0hw2im7in8h49w41k528lwzb1jvdj1q1pvdlsf5n3h4dm8j2yccv"; depends=[Biobase GO_db tilingArray]; }; + derfinderData = derive2 { name="derfinderData"; version="0.106.2"; sha256="0drjk0gazg071z794d6hp88rgvl1913cchrbi23gkplrfvpqdka0"; depends=[]; }; + diffloopdata = derive2 { name="diffloopdata"; version="1.0.2"; sha256="06vc1mgyq9bzx0bkadzzmh9qjfjpwi1hz7cjnzh78afkyn6xsm25"; depends=[]; }; + diggitdata = derive2 { name="diggitdata"; version="1.4.0"; sha256="0rjjh8p58wcpvyliixnrjys4s6r6kriinrk3h0vjr1f7ljb2zci5"; depends=[Biobase viper]; }; + dressCheck = derive2 { name="dressCheck"; version="0.10.0"; sha256="05vsyp4xmpi3374xlama9bi720hns0c0lfl2094pn720mwlzm784"; depends=[Biobase]; }; + dsQTL = derive2 { name="dsQTL"; version="0.10.0"; sha256="1jkg3j8gclm7c8dc2620dvy91z0j7p02nswb4v52p377g3v90pw1"; depends=[Biobase GGBase SummarizedExperiment]; }; + dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.12.0"; sha256="1iqhbzx5dggch34h87g189ldppv3axjmi60vi5cmfl0ngwh7gkyv"; depends=[GEOquery marray]; }; + ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.12.0"; sha256="1g0diwj1ihqw10rfgw2rp7vfnjrknkgmqm9l5snxcsszkqn11ipl"; depends=[affy ecolicdf]; }; + encoDnaseI = derive2 { name="encoDnaseI"; version="0.10.0"; sha256="1ka2m4i6f6wccfrkjzcjgygxmpkf9xfyh1cykzh9zrjc3305pyjd"; depends=[Biobase GGBase GGtools lattice]; }; + estrogen = derive2 { name="estrogen"; version="1.18.0"; sha256="0kimcb33jsanysl60dhmyhz4201f33ni8ap3wk4ikplf3s619l8j"; depends=[affy]; }; + etec16s = derive2 { name="etec16s"; version="1.0.0"; sha256="07ngasmbqiipkxy23kdpjbi72n3mjfk4wkad52sli48s3hh2xssa"; depends=[Biobase metagenomeSeq]; }; + faahKO = derive2 { name="faahKO"; version="1.12.0"; sha256="1sx6jdkv8i1d4lpl4kv2d3c0gk2cycs0gzykngyvz8yap911i82y"; depends=[xcms]; }; + fabiaData = derive2 { name="fabiaData"; version="1.10.0"; sha256="0m51rnsgh4wrq69rpc1i4cn69jvab4y0ib4sr6kpdh8mqrb17n0k"; depends=[Biobase]; }; + facopy_annot = derive2 { name="facopy.annot"; version="0.106.0"; sha256="1bfsnqlcb8lq351anaq1bc2hgzpdsavzpsh81sr7pq0kpinkn35i"; depends=[]; }; + facsDorit = derive2 { name="facsDorit"; version="1.14.0"; sha256="0am46a770gvm0qjb0ah2gbm28yjazg2dfrdagywvyiaadj68krrk"; depends=[prada]; }; + ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.10.0"; sha256="14mfsjgqxrmcf8y9n47yix9qgbi437636978nd2gxggahhvx45z8"; depends=[lumi]; }; + fibroEset = derive2 { name="fibroEset"; version="1.14.0"; sha256="0h6dj4ypwvxi9137mzpzsymw0dkgral0d3fvh8via8l0vkzhxq81"; depends=[Biobase]; }; + fission = derive2 { name="fission"; version="0.106.2"; sha256="0x43py9445w5hw4z9s2br7k2lqlr988bchaw7qjll6qhm5xrbip0"; depends=[SummarizedExperiment]; }; + flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.8.0"; sha256="02dlkyl9zxqy4cns9mrgf98zspzc5ks1qajbg8vy4fnrphykbp0v"; depends=[flowCore]; }; + flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="2.8.0"; sha256="063wq1nv9f3z014qhcq8a060q5n1yxc99knh12vd1kl8blbanjvn"; depends=[]; }; + frmaExampleData = derive2 { name="frmaExampleData"; version="1.8.0"; sha256="1mwyx3xyz82xg9ymyqsiy2iqpcfgw471pmbfd489y15rb7jdl2rh"; depends=[]; }; + furrowSeg = derive2 { name="furrowSeg"; version="1.0.2"; sha256="0j1zvdm7g3f0m8y58izbrkmpsjxi0sx4h24qlbmglj2xhhh34b9i"; depends=[abind dplyr EBImage locfit tiff]; }; + gageData = derive2 { name="gageData"; version="2.10.0"; sha256="17nr1kfn2r5zhwd7sj01iv7wv3rw8bj3dpfm9x4bsg2pby93i2wl"; depends=[]; }; + gaschYHS = derive2 { name="gaschYHS"; version="1.10.0"; sha256="1aaxy1iayi10k7pj4s3jfx7dss929ll11zvps1xcbiz1wfhk9163"; depends=[Biobase]; }; + gatingMLData = derive2 { name="gatingMLData"; version="2.12.0"; sha256="14a2kvg95zvq4ij8adqihr7ajckgzg76y3r1c7bbyd4b46h96l1x"; depends=[]; }; + gcspikelite = derive2 { name="gcspikelite"; version="1.10.0"; sha256="139ig58xnds081q8azkkzpp1mb22xx9cz0m38lpw0xl69ny1h8mv"; depends=[]; }; + geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.8.0"; sha256="10ynnx2r8snnffhwnj620z7blfy4af8rm1il6qy4g7dgs0cx7a4l"; depends=[GenomicFeatures rtracklayer]; }; + genomationData = derive2 { name="genomationData"; version="1.4.2"; sha256="1zl7gg144fs7zfycsmq5492sm1bqy7l527xbc2zj04schd9wsan2"; depends=[]; }; + geuvPack = derive2 { name="geuvPack"; version="1.4.0"; sha256="1jplp7fgcjayvxzrzxxgdwdb89k5jw4xflbjb71mrai11p8za546"; depends=[SummarizedExperiment]; }; + geuvStore = derive2 { name="geuvStore"; version="1.4.2"; sha256="0svfj6axbfyyhwx1v8dpmla9a8f31pq3psqd72zkpgqh25q7zyrn"; depends=[BatchJobs BiocGenerics GenomicRanges gQTLBase]; }; + geuvStore2 = derive2 { name="geuvStore2"; version="1.2.2"; sha256="0dhdf2a10la9vm5vcvdxrzh50va4343h57vvc8711wbris0hqfcr"; depends=[BatchJobs GenomicRanges gQTLBase]; }; + golubEsets = derive2 { name="golubEsets"; version="1.14.0"; sha256="1a1ccsx7jfcgpjmhrdpnysrsa3b7r807vkgsrkri11pidf79kbc2"; depends=[Biobase]; }; + grndata = derive2 { name="grndata"; version="1.4.2"; sha256="0ivddlxc2xd6ncwignrxkp2cy81k17wav42g8m0pjb7ck6qaak6l"; depends=[]; }; + gskb = derive2 { name="gskb"; version="1.3.0"; sha256="16yisw86zhvanigcq9zlxk3wsqdln8cwslija5s8mq68srffc3q4"; depends=[]; }; + h5vcData = derive2 { name="h5vcData"; version="1.106.0"; sha256="00m3l1wwvff3w3nxdbk7sn22i7p2ikdr1mrd5x6f7jbihzii5zdq"; depends=[]; }; + hapmap100khind = derive2 { name="hapmap100khind"; version="1.14.0"; sha256="1rpglhfy3q1m5l54wjir1nsyzqxpp1h1112gyvdxkxdv4jsxfmd2"; depends=[]; }; + hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.14.0"; sha256="1lq1na4v1v2pd96nn59kppiaga9w8ib85qndbv5id0q8fh11xmsf"; depends=[]; }; + hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.14.0"; sha256="1b7pyp4nqp7qkjv5zjvn8q3ha7jn8fk410y50j9vhl147jwfir98"; depends=[]; }; + hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.14.0"; sha256="1cnkvc2miv4gw3gqg0avjdi19vhrpa7b24wm9fdz7ynasi164qqa"; depends=[]; }; + hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.14.0"; sha256="0yylk76s1n9n9yj04726pzs9fx10gng146s4zpbpb2qk14kj0zfr"; depends=[]; }; + hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.14.0"; sha256="0d06wzcrawssamh48ncvys1v0r1iqfg88vf8nx9hbjlyi8a8lw33"; depends=[]; }; + harbChIP = derive2 { name="harbChIP"; version="1.10.0"; sha256="0rpbv423fp7scgkdws6s467a97mv2g4ami3zx0x8p5786ywiv42y"; depends=[Biobase Biostrings IRanges]; }; + healthyFlowData = derive2 { name="healthyFlowData"; version="1.10.0"; sha256="1hmpvgapf75wiwvc4c68k1wglhg04zka51m3fyzsbqqg23g8a8zv"; depends=[flowCore]; }; + hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.10.0"; sha256="1zckhwi7wjns9plp3r7w5v0lv3syydlf0akzgarl5fz28nbjxy42"; depends=[]; }; + hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.10.0"; sha256="02kacr0qkvvh6bx69pmkp6n1y1q6jvizf8dqcdp72bxzav9m2pgc"; depends=[]; }; + hgu2beta7 = derive2 { name="hgu2beta7"; version="1.12.0"; sha256="056p5lmqmady3yaif7flvd266i3a6b1z8vycjfq44zxd4dccdm8m"; depends=[]; }; + hmyriB36 = derive2 { name="hmyriB36"; version="1.8.0"; sha256="1v1gbfg9sqpxlkk4qjrdh09yggqcq0xl32f845iiaxfizsj3xlh0"; depends=[Biobase GGBase]; }; + humanStemCell = derive2 { name="humanStemCell"; version="0.12.0"; sha256="1l2q09i3pl49dp2wksmj8dh81lvly09ldm8ixzz89wz5f39d2bff"; depends=[Biobase hgu133plus2_db]; }; + ind1KG = derive2 { name="ind1KG"; version="0.9.0"; sha256="02f25djy7zxh7d88v00jhpr1f5wa2ijskg5w9i90r2llwssjxx97"; depends=[chopsticks]; }; + iontreeData = derive2 { name="iontreeData"; version="1.8.0"; sha256="1xmbs8vicz7p01bk4xh8lvgdflzhybwfblpx8pdsvbkv5vz3rhkb"; depends=[]; }; + kidpack = derive2 { name="kidpack"; version="1.14.0"; sha256="0lxbi4sn4g68s23kcyaxpxdi6dpz7w3cz7i5n6x9ywa12mbnxzgs"; depends=[Biobase]; }; + leeBamViews = derive2 { name="leeBamViews"; version="1.8.0"; sha256="0bkah146rpvw1kh1r9j8rqjwh07bv5vhy3pc8gca4ssvn1l77js4"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges Rsamtools]; }; + leukemiasEset = derive2 { name="leukemiasEset"; version="1.8.0"; sha256="1kvbk2j385c9jajdvgbpaq0rv8p9nid76fvjpkk2a4babbvbk5f0"; depends=[Biobase]; }; + lumiBarnes = derive2 { name="lumiBarnes"; version="1.12.0"; sha256="07vbrzyd3ihc2b3s5rs538pbq3gm1mqm2xywclx2agm4n318dbbi"; depends=[Biobase lumi]; }; + lungExpression = derive2 { name="lungExpression"; version="0.10.0"; sha256="1nhph1ljbj0z22rh9c0dcljrddgnydhhghpah9fp8qv0hbjlzl1x"; depends=[Biobase]; }; + mAPKLData = derive2 { name="mAPKLData"; version="1.4.2"; sha256="0qn6j547i2d3rndpxb0rwvk9q5i0qkc3nm4gmmpipd34hz9g7yh1"; depends=[]; }; + mammaPrintData = derive2 { name="mammaPrintData"; version="1.8.0"; sha256="1ybc3zrylvwlbzyl5nrzgsfrzfqx5yqhair3x5sansdhrsmc383d"; depends=[]; }; + maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.16.0"; sha256="12v51x33dmj591yhnrgbpvp1v55gkkwmi1r12niprkkzdy5q3jn6"; depends=[]; }; + metaMSdata = derive2 { name="metaMSdata"; version="1.8.0"; sha256="0d79080kmna8zckadbgjgfc4hyxnqsb6pirhjyf015z3qq3w7h3l"; depends=[]; }; + miRNATarget = derive2 { name="miRNATarget"; version="1.10.0"; sha256="0hycvsh3m96aqr888vq14y38r9dj1gdn3nhmvl77rsn19bn7lryp"; depends=[Biobase]; }; + miRcompData = derive2 { name="miRcompData"; version="1.2.0"; sha256="1zl65i127p04vlbx9wy7jmrvbdh679j8sz7qxlvmcbsmbxx43dm2"; depends=[]; }; + minfiData = derive2 { name="minfiData"; version="0.14.0"; sha256="0w4gwk70ka6kic7dy7qfsb9nd791mf5gwr35x3cw7jqi6gdlh29q"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; }; + minionSummaryData = derive2 { name="minionSummaryData"; version="1.2.2"; sha256="0j0jygm9nnw6zjh99l21yncddnqp93pfjsikjv80vlap8bhdndcy"; depends=[]; }; + mitoODEdata = derive2 { name="mitoODEdata"; version="1.8.0"; sha256="1ffjvsw4rj76fa39r51fvhh7xx12zsjxww9p5spg5b8alxd40f6h"; depends=[]; }; + mosaicsExample = derive2 { name="mosaicsExample"; version="1.10.0"; sha256="1r99ig2w8006zzmckcwl9b1831qya1a33z3k1vw88nwakjib5had"; depends=[]; }; + mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.10.0"; sha256="0c8zzbqd4d70fw6xfmnmcs8wfxffy4q5jdibbv58wxyszvvs2215"; depends=[]; }; + msd16s = derive2 { name="msd16s"; version="0.106.0"; sha256="0mii809mrh4h8whas47x32xn5xbslirhf28bi641k7c4yfay4bha"; depends=[Biobase metagenomeSeq]; }; + msdata = derive2 { name="msdata"; version="0.10.0"; sha256="1m8mg19qqv5pmqchjgqk6vbljimg6iw8caz44vj6095pxzjs78cl"; depends=[]; }; + msqc1 = derive2 { name="msqc1"; version="1.0.2"; sha256="1s27aasqy93iscdqla7jdfg12i8fwwq4gb30pnv8g9amrx3ag7a7"; depends=[lattice]; }; + mtbls2 = derive2 { name="mtbls2"; version="1.2.2"; sha256="12l6f7k48ga1kq51svjgz1xw888bpqigm2ry774yv22pi01kq038"; depends=[]; }; + mvoutData = derive2 { name="mvoutData"; version="1.8.0"; sha256="1d6kj8fjh401z0bbqbyy7r509aim63srh0xihhnf8k0v4hnxb2y4"; depends=[affy Biobase lumi]; }; + pRolocdata = derive2 { name="pRolocdata"; version="1.10.0"; sha256="1v0chfpji5pjaq5pfca6d80nqq4rzfm4078i9jmcwzlbsdkpwh63"; depends=[Biobase MSnbase]; }; + parathyroidSE = derive2 { name="parathyroidSE"; version="1.10.0"; sha256="1ynmw06cj2jy61vy6pfjxx2yfmbqh5ks449zg2an02algc7cmhk6"; depends=[SummarizedExperiment]; }; + pasilla = derive2 { name="pasilla"; version="0.12.0"; sha256="128bq3gk8af8c6lyxbzisyqmal0s1vd73rzsf0w1cj46riwb81ya"; depends=[]; }; + pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.10.0"; sha256="071zjb0w6fqwaijkkj6g56wbf7xq2d1a7am4lzmfx1s4rrqlpxk3"; depends=[]; }; + pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.8.1"; sha256="1q1wq5zff2qcqw5i86rrdvlf2y7n87xlcpf6grrahnh3dc8nf42z"; depends=[]; }; + pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.8.1"; sha256="1ln4nnb92wvg84m3haczc390c7d1xm7qbiklvv1yp5f7saqglix9"; depends=[]; }; + pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.8.1"; sha256="1d9sv8m4yi15zyjb3j3iva2530nzfwfb180qqm0v9zj3xqxfarnv"; depends=[]; }; + pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.10.0"; sha256="11gj7mxx5k28ymdsf13132xy1bwablhp98wk5rx32833gx2cfafc"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; + pepDat = derive2 { name="pepDat"; version="0.106.2"; sha256="0gipg8j40966wvqyk77xldfqlcs891g1m47vym63s878lzz87ifm"; depends=[GenomicRanges]; }; + ppiData = derive2 { name="ppiData"; version="0.10.0"; sha256="1v6cgbdlp6dhb4vajp8ck7gpz2hbdzs8qc621xmiyslv7v03w5p8"; depends=[AnnotationDbi graph]; }; + prebsdata = derive2 { name="prebsdata"; version="1.8.0"; sha256="1cx3f99z886c7z83w35pvcw98lq2zkw27qrd4mgsi95qh1z8yz5w"; depends=[]; }; + prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.0.0"; sha256="1d91m8mgq70s26lh3q9jdsa0fgv3p84wvbrvz2vd8r5z5vpph8jv"; depends=[Biobase]; }; + prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.0.0"; sha256="0kiy78nyk420055m81zdiv5m9iwrw1s7bpn4mwdkjfd45klzv9vh"; depends=[Biobase]; }; + prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.0.0"; sha256="13vcfyrl3958wkra6mp2w18q1d3yjcgb0ml8xasqnbicwiv3193y"; depends=[Biobase]; }; + prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.0.0"; sha256="0q0n2blq1d7x20d08621gvcc2s96n0a1h0nwl7lcdb3alk0a3vmd"; depends=[Biobase]; }; + prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.0.0"; sha256="0a94q06vfwmkq687gc4y3h974psq18f9rrpphldv7sscgx7dfniq"; depends=[Biobase]; }; + pumadata = derive2 { name="pumadata"; version="2.8.0"; sha256="1gkfchlr4s8rlfqi6cc3l1n7ppzihlifc7jqvk15vhz6lsrsv0sx"; depends=[affy Biobase oligo puma]; }; + rRDPData = derive2 { name="rRDPData"; version="0.106.0"; sha256="0pbn1aklw2x8yagj65436601drd81fklsgc7kwg8wrr519nb8mjq"; depends=[rRDP]; }; + rcellminerData = derive2 { name="rcellminerData"; version="1.4.2"; sha256="1bsh3i6cfyvg6drl7jz3k53g3bqcr6iz3gc5wb9kcbnvfxa6rzg5"; depends=[Biobase]; }; + rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.10.0"; sha256="1c77rz7bir6rfsmry7f6bn4pzaqpwy178v8hkbkf9l6jskf29yy2"; depends=[]; }; + seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.4.0"; sha256="0ysc83rcciq8isb834wfvz3iwvwa7xky28b4nvyhskblgb7d0ahp"; depends=[]; }; + seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.8.0"; sha256="08d9by2grfpyl6xc137hax10nk8mjdpakg49richcr3g0yql719a"; depends=[]; }; + seqc = derive2 { name="seqc"; version="1.6.0"; sha256="1715vwd5y4pbll271ka0vszj7b4sb0z6xpv2vpkqilw71axwsj7n"; depends=[]; }; + serumStimulation = derive2 { name="serumStimulation"; version="1.8.1"; sha256="0h34yqcazpzh9scp0xpyil33fr10zx67slpn3c3m3vvi8g9aw2n1"; depends=[]; }; + seventyGeneData = derive2 { name="seventyGeneData"; version="1.8.0"; sha256="16ymh2r6g0kficrg2dnlf5hlixbzmi83vz2djxn4w7ws0bm67dfa"; depends=[]; }; + shinyMethylData = derive2 { name="shinyMethylData"; version="0.106.0"; sha256="18r8syb5glkaj6xdwqg1yqwg6lmz4w8z72394zkx58zcirpbdvnw"; depends=[]; }; + simpIntLists = derive2 { name="simpIntLists"; version="1.8.0"; sha256="0l52c7ps0yi7wmjbnl5hf5blm5wizgk0j9qfsz5dli7xp88fhjq5"; depends=[]; }; + stemHypoxia = derive2 { name="stemHypoxia"; version="1.8.0"; sha256="0llcpgp325hzjjhk05l9yhmfsksr6i4sxqvik7b80jd1978wklxm"; depends=[]; }; + stjudem = derive2 { name="stjudem"; version="1.12.0"; sha256="1fya1ma1yi5426l6m4hgisyg54y1pa7j86q5kn0dzibhijn7is4d"; depends=[]; }; + synapterdata = derive2 { name="synapterdata"; version="1.10.0"; sha256="0pnvl1bhfxa6s94csgzbnkfgbryd8yk4x8619794cdgvbxkfy11l"; depends=[synapter]; }; + systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.2.4"; sha256="00difbsafgzxw2n7k5d5rf50sjahrxxdqv65a1vl7ij5vkv1fg6f"; depends=[BiocGenerics]; }; + tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.10.0"; sha256="1ang51lcj9vm1jx2hxm1dmgpl9gii9gkjzcvy0kik5ljkzwp5m6b"; depends=[]; }; + tinesath1probe = derive2 { name="tinesath1probe"; version="1.10.0"; sha256="018xp85f8k1m59vf6yymba5nx1cgq2v3jg029gj2i2k63d59iwx1"; depends=[AnnotationDbi]; }; + tofsimsData = derive2 { name="tofsimsData"; version="1.0.2"; sha256="1kkl337qpipxbq99k2s84398pdfi1mmzddvwj5g3ni95ibgppipz"; depends=[]; }; + tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.10.0"; sha256="0hcg3d55lklfkqbrbir3q9qsbb3r9nqk3g2qmipjfa1s16vdbmvj"; depends=[Biobase]; }; + tximportData = derive2 { name="tximportData"; version="1.0.2"; sha256="1my9afgaazmh8rif298iym9hw0ld9iy18fbz78p5qxxr016j1vqz"; depends=[]; }; + waveTilingData = derive2 { name="waveTilingData"; version="1.8.0"; sha256="0qc512xw3mpmx3dchwlpp8wsapk9jghnfgpq7f6332592r9dsr5k"; depends=[]; }; + yeastCC = derive2 { name="yeastCC"; version="1.12.0"; sha256="0j90r5mhx44x85n42a5ljyhk5xs7mpjjckrqgc5y5rlbas3922jm"; depends=[Biobase]; }; + yeastExpData = derive2 { name="yeastExpData"; version="0.18.0"; sha256="1cpn0jwxlpzyv3fjg72z87wfc6l3l39yzdkyyaqkwk55fqgzgg24"; depends=[graph]; }; + yeastGSData = derive2 { name="yeastGSData"; version="0.10.0"; sha256="1dfdi86qdpcx62hpmdrkhw4qcs9nnsyn3pf8535ky9g9x9004p2m"; depends=[]; }; + yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.8.0"; sha256="15cmh17lzmbby3z028wrd90aycd64r70i9r15lffvkbp7f443q63"; depends=[]; }; + yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.10.0"; sha256="1xj2bszfyzm440nf0w4gbskh1j0lbzqdhr0c88ilppmmbfmgv9nq"; depends=[]; }; + yri1kgv = derive2 { name="yri1kgv"; version="0.14.0"; sha256="1a0811vzim9cv3p37s6hbd4pqvzf4xnzi53w0kc5wrc8mz1634aa"; depends=[Biobase GGBase]; }; + yriMulti = derive2 { name="yriMulti"; version="0.0.9"; sha256="0v984z7bvqzpsj0d0zw1dqi6zavv3s5mgx7p2sbm433wfk1jjs0a"; depends=[dsQTL GenomicRanges geuvPack gQTLBase Homo_sapiens SummarizedExperiment]; }; + zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="0.106.2"; sha256="0v3j968815jwcxpj11hml5z6a06kcgvmh8lz539c2nryixr5dj53"; depends=[]; }; } |