Merge branch 'master' into staging-next

12 files changed, 53 insertions, 38 deletions

diff --git a/pkgs/development/python-modules/gst-python/default.nix b/pkgs/development/python-modules/gst-python/default.nix
index dc15e4b043d2..00d05e189126 100644
--- a/pkgs/development/python-modules/gst-python/default.nix
+++ b/pkgs/development/python-modules/gst-python/default.nix
@@ -45,6 +45,13 @@ buildPythonPackage rec {
       url = "https://github.com/GStreamer/gst-python/commit/f98c206bdf01529f8ea395a719b10baf2bdf717f.patch";
       sha256 = "04n4zrnfivgr7iaqw4sjlbd882s8halc2bbbhfxqf0sg2lqwmrxg";
     })
+  ] ++ [
+    # Fix linking against Python 3.8
+    # https://gitlab.freedesktop.org/gstreamer/gst-python/merge_requests/30
+    (fetchpatch {
+      url = "https://gitlab.freedesktop.org/gstreamer/gst-python/commit/22f28155d86e27c4134de4ed2861264003fcfd23.patch";
+      sha256 = "Y70qVguHUBmmRVMFBKAP0d6anBQw5W0TKyu2bAwxbQg=";
+    })
   ];
 
   mesonFlags = [
diff --git a/pkgs/development/python-modules/pandocfilters/default.nix b/pkgs/development/python-modules/pandocfilters/default.nix
index 5b87593e0c67..f688d97c91d1 100644
--- a/pkgs/development/python-modules/pandocfilters/default.nix
+++ b/pkgs/development/python-modules/pandocfilters/default.nix
@@ -3,7 +3,7 @@
 , fetchPypi
 }:
 
-buildPythonPackage rec{
+buildPythonPackage rec {
   version = "1.4.2";
   pname = "pandocfilters";
 
diff --git a/pkgs/development/python-modules/periodictable/default.nix b/pkgs/development/python-modules/periodictable/default.nix
index e35362326805..acbfc06850e4 100644
--- a/pkgs/development/python-modules/periodictable/default.nix
+++ b/pkgs/development/python-modules/periodictable/default.nix
@@ -1,6 +1,6 @@
 {lib, fetchPypi, buildPythonPackage, numpy, pyparsing}:
 
-buildPythonPackage rec{
+buildPythonPackage rec {
   pname = "periodictable";
   version = "1.5.2";
 
diff --git a/pkgs/development/python-modules/pycurl/default.nix b/pkgs/development/python-modules/pycurl/default.nix
index e65ae7a167b3..6b6aad2b2342 100644
--- a/pkgs/development/python-modules/pycurl/default.nix
+++ b/pkgs/development/python-modules/pycurl/default.nix
@@ -36,6 +36,8 @@ buildPythonPackage rec {
   ];
 
   # skip impure or flakey tests
+  # See also:
+  #   * https://github.com/NixOS/nixpkgs/issues/77304
   checkPhase = ''
     HOME=$TMPDIR pytest tests -k "not test_ssl_in_static_libs \
                      and not test_keyfunction \
@@ -44,7 +46,8 @@ buildPythonPackage rec {
                      and not test_libcurl_ssl_nss \
                      and not test_libcurl_ssl_openssl" \
                  --ignore=tests/getinfo_test.py \
-                 --ignore=tests/memory_mgmt_test.py
+                 --ignore=tests/memory_mgmt_test.py \
+                 --ignore=tests/multi_memory_mgmt_test.py
   '';
 
   preConfigure = ''
diff --git a/pkgs/development/python-modules/pytest-dependency/default.nix b/pkgs/development/python-modules/pytest-dependency/default.nix
index 13806781125e..9e570a801f99 100644
--- a/pkgs/development/python-modules/pytest-dependency/default.nix
+++ b/pkgs/development/python-modules/pytest-dependency/default.nix
@@ -1,23 +1,14 @@
 { stdenv, buildPythonPackage, fetchPypi, fetchpatch, pytest }:
 
 buildPythonPackage rec {
-  version = "0.4.0";
+  version = "0.5.1";
   pname = "pytest-dependency";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "bda0ef48e6a44c091399b12ab4a7e580d2dd8294c222b301f88d7d57f47ba142";
+    sha256 = "c2a892906192663f85030a6ab91304e508e546cddfe557d692d61ec57a1d946b";
   };
 
-  patches = [
-    # Fix tests for pytest>=4.2.0. Remove with the next release
-    (fetchpatch {
-      url = "https://github.com/RKrahl/pytest-dependency/commit/089395bf77e629ee789666361ee12395d840252c.patch";
-      sha256 = "1nkha2gndrr3mx11kx2ipxhphqd6wr25hvkrfwzyrispqfhgl0wm";
-      excludes = [ "doc/src/changelog.rst" ];
-    })
-  ];
-
   propagatedBuildInputs = [ pytest ];
 
   checkInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/python-pam/default.nix b/pkgs/development/python-modules/python-pam/default.nix
new file mode 100644
index 000000000000..4065cd7c0145
--- /dev/null
+++ b/pkgs/development/python-modules/python-pam/default.nix
@@ -0,0 +1,23 @@
+{ stdenv, buildPythonPackage, fetchPypi, pam }:
+
+buildPythonPackage rec {
+  pname = "python-pam";
+  version = "1.8.4";
+
+  src = fetchPypi {
+    inherit pname version;
+    sha256 = "16whhc0vr7gxsbzvsnq65nq8fs3wwmx755cavm8kkczdkz4djmn8";
+  };
+
+  postPatch = ''
+    substituteInPlace pam.py --replace 'find_library("pam")' \
+      '"${pam}/lib/libpam${stdenv.hostPlatform.extensions.sharedLibrary}"'
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Python PAM module using ctypes";
+    homepage = "https://github.com/FirefighterBlu3/python-pam";
+    maintainers = with maintainers; [ abbradar ];
+    license = licenses.mit;
+  };
+}
diff --git a/pkgs/development/python-modules/pytorch/default.nix b/pkgs/development/python-modules/pytorch/default.nix
index 2318738411f4..80c3c6d72931 100644
--- a/pkgs/development/python-modules/pytorch/default.nix
+++ b/pkgs/development/python-modules/pytorch/default.nix
@@ -104,7 +104,7 @@ let
     "LD_LIBRARY_PATH=${cudaStub}\${LD_LIBRARY_PATH:+:}$LD_LIBRARY_PATH ";
 
 in buildPythonPackage rec {
-  version = "1.4.1";
+  version = "1.5.0";
   pname = "pytorch";
   disabled = !isPy3k;
 
@@ -118,7 +118,7 @@ in buildPythonPackage rec {
     repo   = "pytorch";
     rev    = "v${version}";
     fetchSubmodules = true;
-    sha256 = "1aa1il4f98pswfj20cv27yfb91l1jcq4515i7mvq7sh5647yzwms";
+    sha256 = "19qyrjd72mc0llcfn50av8ym05f2iwa38gv068wykji4ph7qjlv2";
   };
 
   preConfigure = lib.optionalString cudaSupport ''
@@ -128,24 +128,6 @@ in buildPythonPackage rec {
     export CUDNN_INCLUDE_DIR=${cudnn}/include
   '';
 
-  patches = [
-    # Prevents a race condition which would be introduced by pull 30333.
-    # See https://github.com/pytorch/pytorch/issues/32277
-    # Can be removed >1.5.0.
-    (fetchpatch {
-      url = "https://patch-diff.githubusercontent.com/raw/pytorch/pytorch/pull/30332.patch";
-      sha256 = "1v9dwbhz3rdxcx6sz8y8j9n3bj6nqs78b1r8yg89yc15n6l4cqx2";
-    })
-
-    # Fixes errors with gcc-9 compilation. Cherry-picked on advice from ezyang.
-    # See https://github.com/pytorch/pytorch/issues/32277
-    # Can be removed >1.5.0.
-    (fetchpatch {
-      url = "https://patch-diff.githubusercontent.com/raw/pytorch/pytorch/pull/30333.patch";
-      sha256 = "139413fl37h2fnil0cv99a67mqqnsh02k74b92by1qyr6pcfyg3q";
-    })
-  ];
-
   # Use pytorch's custom configurations
   dontUseCmakeConfigure = true;
 
diff --git a/pkgs/development/python-modules/pyxdg/default.nix b/pkgs/development/python-modules/pyxdg/default.nix
index a5cb694b4c15..65cb4389583c 100644
--- a/pkgs/development/python-modules/pyxdg/default.nix
+++ b/pkgs/development/python-modules/pyxdg/default.nix
@@ -1,6 +1,7 @@
 { stdenv
 , buildPythonPackage
 , fetchPypi
+, fetchpatch
 }:
 
 buildPythonPackage rec {
@@ -15,6 +16,14 @@ buildPythonPackage rec {
   # error: invalid command 'test'
   doCheck = false;
 
+  patches = [ 
+    # see: https://gitlab.freedesktop.org/xdg/pyxdg/-/merge_requests/5 
+    (fetchpatch {
+      url = "https://gitlab.freedesktop.org/xdg/pyxdg/-/commit/78405aaa34463db2c6f33ca28ae2293dd3bb1e91.patch";
+      sha256 = "17cjax546rkqv5kvwczjqjdd6vmlvcxjanz0296dlfq23j2wbx63";
+    })
+  ];
+
   meta = with stdenv.lib; {
     homepage = "http://freedesktop.org/wiki/Software/pyxdg";
     description = "Contains implementations of freedesktop.org standards";
diff --git a/pkgs/development/python-modules/toolz/default.nix b/pkgs/development/python-modules/toolz/default.nix
index cb635d227f7c..e0039057d828 100644
--- a/pkgs/development/python-modules/toolz/default.nix
+++ b/pkgs/development/python-modules/toolz/default.nix
@@ -4,7 +4,7 @@
 , nose
 }:
 
-buildPythonPackage rec{
+buildPythonPackage rec {
   pname = "toolz";
   version = "0.10.0";
 
diff --git a/pkgs/development/python-modules/trezor_agent/default.nix b/pkgs/development/python-modules/trezor_agent/default.nix
index ad4a30d97c50..2c254aa25bbf 100644
--- a/pkgs/development/python-modules/trezor_agent/default.nix
+++ b/pkgs/development/python-modules/trezor_agent/default.nix
@@ -13,7 +13,7 @@
 , pinentry
 }:
 
-buildPythonPackage rec{
+buildPythonPackage rec {
   pname = "trezor_agent";
   version = "0.10.0";
 
diff --git a/pkgs/development/python-modules/x11_hash/default.nix b/pkgs/development/python-modules/x11_hash/default.nix
index 7cc921047ac1..22ce5917e2a6 100644
--- a/pkgs/development/python-modules/x11_hash/default.nix
+++ b/pkgs/development/python-modules/x11_hash/default.nix
@@ -3,7 +3,7 @@
 , fetchPypi
 }:
 
-buildPythonPackage rec{
+buildPythonPackage rec {
   version = "1.4";
   pname = "x11_hash";
 
diff --git a/pkgs/development/python-modules/yenc/default.nix b/pkgs/development/python-modules/yenc/default.nix
index 13c8d53f19b3..453f3113853b 100644
--- a/pkgs/development/python-modules/yenc/default.nix
+++ b/pkgs/development/python-modules/yenc/default.nix
@@ -6,7 +6,7 @@
 , isPy3k
 }:
 
-buildPythonPackage rec{
+buildPythonPackage rec {
   pname = "yenc";
   version = "0.4.0";
   src = fetchurl {