Merge master into staging-next

6 files changed, 46 insertions, 20 deletions

diff --git a/pkgs/development/libraries/libfsm/default.nix b/pkgs/development/libraries/libfsm/default.nix
index ce7d615f4d31..78f1f66623a4 100644
--- a/pkgs/development/libraries/libfsm/default.nix
+++ b/pkgs/development/libraries/libfsm/default.nix
@@ -4,13 +4,13 @@
 
 stdenv.mkDerivation rec {
   pname = "libfsm";
-  version = "0.1pre1869_${builtins.substring 0 7 src.rev}";
+  version = "0.1pre1905_${builtins.substring 0 8 src.rev}";
 
   src = fetchFromGitHub {
     owner  = "katef";
-    repo   = "libfsm";
-    rev    = "f70c3c5778a79eeecb52f9fd35c7cbc241db0ed6";
-    sha256 = "1hgv272jdv6dwnsdjajyky537z84q0cwzspw9br46qj51h8gkwvx";
+    repo   = pname;
+    rev    = "bd5937fad42b26a86bac1fe3ec49eff73581bd1d";
+    sha256 = "1q3grbmvjnnvc2sshswbd40cc2j2hnwibmljcqx9jqgda0wd6pgv";
     fetchSubmodules = true;
   };
 
@@ -22,12 +22,16 @@ stdenv.mkDerivation rec {
   # if we use stdenv vs clangStdenv, we don't know which, and CC=cc in all
   # cases.) it's unclear exactly what should be done if we want those flags,
   # but the defaults work fine.
-  buildPhase = "PREFIX=$out bmake -r install";
+  buildPhase = "PREFIX=$out bmake -r -j$NIX_BUILD_CORES";
+  installPhase = ''
+    PREFIX=$out bmake -r install
+    runHook postInstall
+  '';
 
   # fix up multi-output install. we also have to fix the pkgconfig libdir
   # file; it uses prefix=$out; libdir=${prefix}/lib, which is wrong in
   # our case; libdir should really be set to the $lib output.
-  installPhase = ''
+  postInstall = ''
     mkdir -p $lib $dev/lib
 
     mv $out/lib             $lib/lib
diff --git a/pkgs/development/libraries/librsync/default.nix b/pkgs/development/libraries/librsync/default.nix
index 6c958feab77f..02a8abb7c856 100644
--- a/pkgs/development/libraries/librsync/default.nix
+++ b/pkgs/development/libraries/librsync/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   pname = "librsync";
-  version = "2.1.0";
+  version = "2.2.1";
 
   src = fetchFromGitHub {
     owner = "librsync";
     repo = "librsync";
     rev = "v${version}";
-    sha256 = "03ncx7a2zd93b3jaq7b62nwn8qcwmf04jfvljnpxj5wsxl2agkp7";
+    sha256 = "08wdlxsa9zg2pyasz1lwg70d5psi4amv81v4yxwffx67ndzb9yp5";
   };
 
   nativeBuildInputs = [ cmake ];
diff --git a/pkgs/development/libraries/libstrophe/default.nix b/pkgs/development/libraries/libstrophe/default.nix
index 0ef96f675055..b48bd15909de 100644
--- a/pkgs/development/libraries/libstrophe/default.nix
+++ b/pkgs/development/libraries/libstrophe/default.nix
@@ -2,17 +2,17 @@
 
 stdenv.mkDerivation rec {
   pname = "libstrophe";
-  version = "0.9.2";
+  version = "0.9.3";
 
   src = fetchFromGitHub {
     owner = "strophe";
-    repo = "libstrophe";
+    repo = pname;
     rev = version;
-    sha256 = "1milna92h8wzxax8ll362zvb70091nmfks5lmd105vk0478zraca";
+    sha256 = "1g1l0w9z9hdy5ncdvd9097gi7k7783did6py5h9camlpb2fnk5mk";
   };
 
-  nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ automake autoconf openssl expat libtool check ];
+  nativeBuildInputs = [ automake autoconf pkgconfig libtool check ];
+  buildInputs = [ openssl expat ];
 
   dontDisableStatic = true;
 
@@ -27,9 +27,9 @@ stdenv.mkDerivation rec {
       minimal dependencies and is configurable for various environments. It
       runs well on both Linux, Unix, and Windows based platforms.
     '';
-    homepage = http://strophe.im/libstrophe/;
-    license = with stdenv.lib.licenses; [gpl3 mit];
+    homepage = "http://strophe.im/libstrophe/";
+    license = with stdenv.lib.licenses; [ gpl3 mit ];
     platforms = stdenv.lib.platforms.linux;
-    maintainers = with stdenv.lib.maintainers; [devhell flosse];
+    maintainers = with stdenv.lib.maintainers; [ devhell flosse ];
   };
 }
diff --git a/pkgs/development/libraries/openmpi/default.nix b/pkgs/development/libraries/openmpi/default.nix
index 2a293e0b8562..5996dda1e74e 100644
--- a/pkgs/development/libraries/openmpi/default.nix
+++ b/pkgs/development/libraries/openmpi/default.nix
@@ -1,5 +1,8 @@
 { stdenv, fetchurl, fetchpatch, gfortran, perl, libnl
-, rdma-core, zlib, numactl, libevent, hwloc, pkgsTargetTarget
+, rdma-core, zlib, numactl, libevent, hwloc, pkgsTargetTarget, symlinkJoin
+
+# Enable CUDA support
+, cudaSupport ? false, cudatoolkit ? null
 
 # Enable the Sun Grid Engine bindings
 , enableSGE ? false
@@ -8,9 +11,15 @@
 , enablePrefix ? false
 }:
 
+assert !cudaSupport || cudatoolkit != null;
+
 let
   version = "4.0.2";
 
+  cudatoolkit_joined = symlinkJoin {
+    name = "${cudatoolkit.name}-unsplit";
+    paths = [ cudatoolkit.out cudatoolkit.lib ];
+  };
 in stdenv.mkDerivation rec {
   pname = "openmpi";
   inherit version;
@@ -33,15 +42,20 @@ in stdenv.mkDerivation rec {
 
   buildInputs = with stdenv; [ gfortran zlib ]
     ++ lib.optionals isLinux [ libnl numactl ]
+    ++ lib.optionals cudaSupport [ cudatoolkit ]
     ++ [ libevent hwloc ]
     ++ lib.optional (isLinux || isFreeBSD) rdma-core;
 
   nativeBuildInputs = [ perl ];
 
-  configureFlags = with stdenv; [ "--disable-mca-dso" ]
+  configureFlags = with stdenv; lib.optional (!cudaSupport) "--disable-mca-dso"
     ++ lib.optional isLinux  "--with-libnl=${libnl.dev}"
     ++ lib.optional enableSGE "--with-sge"
     ++ lib.optional enablePrefix "--enable-mpirun-prefix-by-default"
+    # TODO: add UCX support, which is recommended to use with cuda for the most robust OpenMPI build
+    # https://github.com/openucx/ucx
+    # https://www.open-mpi.org/faq/?category=buildcuda
+    ++ lib.optionals cudaSupport [ "--with-cuda=${cudatoolkit_joined}" "--enable-dlopen" ]
     ;
 
   enableParallelBuilding = true;
@@ -69,6 +83,10 @@ in stdenv.mkDerivation rec {
 
   doCheck = true;
 
+  passthru = {
+    inherit cudaSupport cudatoolkit;
+  };
+
   meta = with stdenv.lib; {
     homepage = https://www.open-mpi.org/;
     description = "Open source MPI-3 implementation";
diff --git a/pkgs/development/libraries/packr/default.nix b/pkgs/development/libraries/packr/default.nix
index e2be8ded31cb..4482a9cd312d 100644
--- a/pkgs/development/libraries/packr/default.nix
+++ b/pkgs/development/libraries/packr/default.nix
@@ -5,13 +5,13 @@
 
 buildGoModule rec {
   pname = "packr";
-  version = "2.6.0";
+  version = "2.7.1";
 
   src = fetchFromGitHub {
     owner = "gobuffalo";
     repo = pname;
     rev = "v${version}";
-    sha256 = "11bd0s3hyzvhcg1q0iahv2w9f0w1k57jfxgswhz7dyndxvvr2b8i";
+    sha256 = "0m5kl2fq8gf1v4vllgag2xl8fd382sdgqrcdb8f5alsnrdn08kb9";
   };
 
   subPackages = [ "packr" "v2/packr2" ];
diff --git a/pkgs/development/libraries/science/math/magma/default.nix b/pkgs/development/libraries/science/math/magma/default.nix
index ef4e89aecb84..6a07ebdb862f 100644
--- a/pkgs/development/libraries/science/math/magma/default.nix
+++ b/pkgs/development/libraries/science/math/magma/default.nix
@@ -24,6 +24,10 @@ in stdenv.mkDerivation {
 
   MKLROOT = optionalString mklSupport mkl;
 
+  preConfigure = ''
+    export CC=${cudatoolkit.cc}/bin/gcc CXX=${cudatoolkit.cc}/bin/g++
+  '';
+
   enableParallelBuilding=true;
   buildFlags = [ "magma" "magma_sparse" ];