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author | Artturin <Artturin@artturin.com> | 2023-02-19 21:23:07 +0200 |
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committer | Artturin <Artturin@artturin.com> | 2023-02-22 21:23:04 +0200 |
commit | 6f6cc4a22db345c66bcb69c26469b0140ca3be44 (patch) | |
tree | e851a90035e6371da52a64732344873f43de0195 /pkgs/applications/science | |
parent | 425e4250dbaab761b638542119b9c5cc604f1d86 (diff) | |
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treewide: use toString on list NIX_CFLAGS_COMPILE
with structuredAttrs lists will be bash arrays which cannot be exported which will be a issue with some patches and some wrappers like cc-wrapper
Diffstat (limited to 'pkgs/applications/science')
11 files changed, 11 insertions, 11 deletions
diff --git a/pkgs/applications/science/biology/bayescan/default.nix b/pkgs/applications/science/biology/bayescan/default.nix index cd5bb3210364..d33b27048ac5 100644 --- a/pkgs/applications/science/biology/bayescan/default.nix +++ b/pkgs/applications/science/biology/bayescan/default.nix @@ -29,7 +29,7 @@ stdenv.mkDerivation rec { cp -r ../*pdf ../input_examples ../"R functions" $out/share/doc/bayescan ''; - NIX_CFLAGS_COMPILE = [ "-std=c++14" ]; + NIX_CFLAGS_COMPILE = toString [ "-std=c++14" ]; meta = with lib; { description = "Detecting natural selection from population-based genetic data"; diff --git a/pkgs/applications/science/biology/cmtk/default.nix b/pkgs/applications/science/biology/cmtk/default.nix index 42ce5f934e82..b0944d1370a0 100644 --- a/pkgs/applications/science/biology/cmtk/default.nix +++ b/pkgs/applications/science/biology/cmtk/default.nix @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; - NIX_CFLAGS_COMPILE = [ + NIX_CFLAGS_COMPILE = toString [ "-std=c++11" (lib.optional stdenv.cc.isClang "-Wno-error=c++11-narrowing") ]; diff --git a/pkgs/applications/science/biology/minia/default.nix b/pkgs/applications/science/biology/minia/default.nix index 6b6bc300e0d9..13347b2148d3 100644 --- a/pkgs/applications/science/biology/minia/default.nix +++ b/pkgs/applications/science/biology/minia/default.nix @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { patches = [ ./no-bundle.patch ]; - NIX_CFLAGS_COMPILE = [ "-Wformat" ]; + NIX_CFLAGS_COMPILE = toString [ "-Wformat" ]; nativeBuildInputs = [ cmake ]; buildInputs = [ hdf5 boost ]; diff --git a/pkgs/applications/science/biology/niftyreg/default.nix b/pkgs/applications/science/biology/niftyreg/default.nix index d5f625893e92..58ad9db7f4e2 100644 --- a/pkgs/applications/science/biology/niftyreg/default.nix +++ b/pkgs/applications/science/biology/niftyreg/default.nix @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "07v9v9s41lvw72wpb1jgh2nzanyc994779bd35p76vg8mzifmprl"; }; - NIX_CFLAGS_COMPILE = [ "-Wno-error=narrowing" ]; + NIX_CFLAGS_COMPILE = toString [ "-Wno-error=narrowing" ]; nativeBuildInputs = [ cmake ]; buildInputs = [ zlib ]; diff --git a/pkgs/applications/science/biology/octopus/default.nix b/pkgs/applications/science/biology/octopus/default.nix index b7c8c138cb82..2289a3969561 100644 --- a/pkgs/applications/science/biology/octopus/default.nix +++ b/pkgs/applications/science/biology/octopus/default.nix @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { sha256 = "sha256-VaUr63v7mzhh4VBghH7a7qrqOYwl6vucmmKzTi9yAjY="; }) ]; - NIX_CFLAGS_COMPILE = [ + NIX_CFLAGS_COMPILE = toString [ # Needed with GCC 12 "-Wno-error=deprecated-declarations" ]; diff --git a/pkgs/applications/science/biology/strelka/default.nix b/pkgs/applications/science/biology/strelka/default.nix index 8585f3770fbc..4063669116ed 100644 --- a/pkgs/applications/science/biology/strelka/default.nix +++ b/pkgs/applications/science/biology/strelka/default.nix @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; buildInputs = [ zlib python2 ]; - NIX_CFLAGS_COMPILE = [ + NIX_CFLAGS_COMPILE = toString [ "-Wno-error=maybe-uninitialized" "-Wno-error=pessimizing-move" ]; diff --git a/pkgs/applications/science/logic/klee/default.nix b/pkgs/applications/science/logic/klee/default.nix index 024e6e526c4e..bbe0b11cd403 100644 --- a/pkgs/applications/science/logic/klee/default.nix +++ b/pkgs/applications/science/logic/klee/default.nix @@ -96,7 +96,7 @@ in stdenv.mkDerivation rec { ]; # Silence various warnings during the compilation of fortified bitcode. - NIX_CFLAGS_COMPILE = ["-Wno-macro-redefined"]; + NIX_CFLAGS_COMPILE = toString ["-Wno-macro-redefined"]; prePatch = '' patchShebangs . diff --git a/pkgs/applications/science/math/calculix/default.nix b/pkgs/applications/science/math/calculix/default.nix index 4b0ae6f8ac9d..2d2fb0a92d93 100644 --- a/pkgs/applications/science/math/calculix/default.nix +++ b/pkgs/applications/science/math/calculix/default.nix @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { buildInputs = [ arpack spooles blas lapack ]; - NIX_CFLAGS_COMPILE = [ + NIX_CFLAGS_COMPILE = toString [ "-I${spooles}/include/spooles" "-std=legacy" ]; diff --git a/pkgs/applications/science/math/mxnet/default.nix b/pkgs/applications/science/math/mxnet/default.nix index 021593124a37..3f0c5511c201 100644 --- a/pkgs/applications/science/math/mxnet/default.nix +++ b/pkgs/applications/science/math/mxnet/default.nix @@ -54,7 +54,7 @@ stdenv.mkDerivation rec { ] else [ "-DUSE_CUDA=OFF" ]) ++ lib.optional (!cudnnSupport) "-DUSE_CUDNN=OFF"; - NIX_CFLAGS_COMPILE = [ + NIX_CFLAGS_COMPILE = toString [ # Needed with GCC 12 "-Wno-error=maybe-uninitialized" "-Wno-error=uninitialized" diff --git a/pkgs/applications/science/math/perseus/default.nix b/pkgs/applications/science/math/perseus/default.nix index d9921e68edb1..d0a9298cebd3 100644 --- a/pkgs/applications/science/math/perseus/default.nix +++ b/pkgs/applications/science/math/perseus/default.nix @@ -13,7 +13,7 @@ stdenv.mkDerivation { }; sourceRoot = "."; - NIX_CFLAGS_COMPILE = [ "-std=c++14" ]; + NIX_CFLAGS_COMPILE = toString [ "-std=c++14" ]; buildPhase = '' g++ Pers.cpp -O3 -fpermissive -o perseus ''; diff --git a/pkgs/applications/science/misc/fityk/default.nix b/pkgs/applications/science/misc/fityk/default.nix index a4aa6457d608..0aeaf714806d 100644 --- a/pkgs/applications/science/misc/fityk/default.nix +++ b/pkgs/applications/science/misc/fityk/default.nix @@ -37,7 +37,7 @@ stdenv.mkDerivation rec { swig3 ]; - NIX_CFLAGS_COMPILE = [ + NIX_CFLAGS_COMPILE = toString [ "-std=c++11" ]; 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