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| author | Zitrone <74491719+quantenzitrone@users.noreply.github.com> | 2024-06-16 23:18:13 +0000 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2024-06-16 20:18:13 -0300 |
| commit | 63b875e099c14114b0dfdb21401a04de62903222 (patch) | |
| tree | ee54f9276ef8d98064169d68e40dea34420513a7 /pkgs/applications/science | |
| parent | 80f3f19e1edb6c373c51764779544f89cd24ca73 (diff) | |
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SPAdes: refactor
Diffstat (limited to 'pkgs/applications/science')
| -rw-r--r-- | pkgs/applications/science/biology/spades/default.nix | 32 |
1 files changed, 0 insertions, 32 deletions
diff --git a/pkgs/applications/science/biology/spades/default.nix b/pkgs/applications/science/biology/spades/default.nix deleted file mode 100644 index 0b0491a71aae..000000000000 --- a/pkgs/applications/science/biology/spades/default.nix +++ /dev/null @@ -1,32 +0,0 @@ -{ lib, stdenv, fetchurl, zlib, bzip2, cmake, python3 }: - -stdenv.mkDerivation rec { - pname = "SPAdes"; - version = "3.15.5"; - - src = fetchurl { - url = "http://cab.spbu.ru/files/release${version}/${pname}-${version}.tar.gz"; - sha256 = "sha256-FVw2QNVx8uexmgUDHR/Q0ZvYLfeF04hw+5O9JBsSu/o="; - }; - - nativeBuildInputs = [ cmake ]; - - buildInputs = [ zlib bzip2 python3 ]; - - doCheck = true; - - sourceRoot = "${pname}-${version}/src"; - - env.CXXFLAGS = toString [ - # GCC 13: error: 'uint32_t' does not name a type - "-include cstdint" - ]; - - meta = with lib; { - description = "St. Petersburg genome assembler: assembly toolkit containing various assembly pipelines"; - license = licenses.gpl2Only; - homepage = "http://cab.spbu.ru/software/spades/"; - platforms = [ "x86_64-linux" "x86_64-darwin" ]; - maintainers = [ maintainers.bzizou ]; - }; -} |