Merge recent master into staging

Nixpkgs Hydra: ?compare=1157272

TODO: port e22889064f82be3

Conflicts:
	nixos/tests/gnome3_10.nix (auto-solved)
	pkgs/applications/video/aegisub/default.nix
	pkgs/development/libraries/boost/1.55.nix

5 files changed, 11 insertions, 12 deletions

diff --git a/pkgs/applications/science/electronics/pulseview/default.nix b/pkgs/applications/science/electronics/pulseview/default.nix
index f9369efe96e5..07724d932541 100644
--- a/pkgs/applications/science/electronics/pulseview/default.nix
+++ b/pkgs/applications/science/electronics/pulseview/default.nix
@@ -10,7 +10,7 @@ stdenv.mkDerivation rec {
     sha256 = "1pf1dgwd9j586nqmni6gqf3qxrsmawcmi9wzqfzqkjci18xd7dgy";
   };
 
-  buildInputs = [ pkgconfig cmake glib qt4 boost boost.lib libsigrok
+  buildInputs = [ pkgconfig cmake glib qt4 boost libsigrok
     libsigrokdecode libserialport libzip udev libusb1 libftdi
   ];
 
diff --git a/pkgs/applications/science/logic/coq/HEAD.nix b/pkgs/applications/science/logic/coq/HEAD.nix
index bf426bc42c2f..c9c8396c37a7 100644
--- a/pkgs/applications/science/logic/coq/HEAD.nix
+++ b/pkgs/applications/science/logic/coq/HEAD.nix
@@ -3,7 +3,7 @@
 {stdenv, fetchgit, writeText, pkgconfig, ocaml, findlib, camlp5, ncurses, lablgtk ? null}:
 
 let
-  version = "8.5pre-2313bde0";
+  version = "8.5pre-edbd6a21";
   coq-version = "8.5";
   buildIde = lablgtk != null;
   ideFlags = if buildIde then "-lablgtkdir ${lablgtk}/lib/ocaml/*/site-lib/lablgtk2 -coqide opt" else "";
@@ -17,8 +17,8 @@ stdenv.mkDerivation {
 
   src = fetchgit {
     url = git://scm.gforge.inria.fr/coq/coq.git;
-    rev = "2313bde0116a5916912bebbaca77d291f7b2760a";
-    sha256 = "116b8060a47a7b2d0cac72d86f7e320bec99b6d450614d1e6b92ff919619c509";
+    rev = "edbd6a211c934778d9721c36463836ef902b4fdd";
+    sha256 = "19zk1lghqljh86z2kv6kpxwzinpkbwxzf244dmszx31zw4zdrskl";
   };
 
   buildInputs = [ pkgconfig ocaml findlib camlp5 ncurses lablgtk ];
diff --git a/pkgs/applications/science/logic/coq/default.nix b/pkgs/applications/science/logic/coq/default.nix
index f0f62bfb3537..721cd4ffa083 100644
--- a/pkgs/applications/science/logic/coq/default.nix
+++ b/pkgs/applications/science/logic/coq/default.nix
@@ -3,7 +3,7 @@
 {stdenv, fetchurl, pkgconfig, writeText, ocaml, findlib, camlp5, ncurses, lablgtk ? null}:
 
 let
-  version = "8.4pl4";
+  version = "8.4pl5";
   coq-version = "8.4";
   buildIde = lablgtk != null;
   ideFlags = if buildIde then "-lablgtkdir ${lablgtk}/lib/ocaml/*/site-lib/lablgtk2 -coqide opt" else "";
@@ -17,7 +17,7 @@ stdenv.mkDerivation {
 
   src = fetchurl {
     url = "http://coq.inria.fr/distrib/V${version}/files/coq-${version}.tar.gz";
-    sha256 = "00bzf4kfbd0g279jrr8ynzvb9wqcly3wi577bkrxivhrg2msxhq6";
+    sha256 = "0iajsabyrgypk1ncm0kqcxqv02k24xa1bayaxacjgmsqiavmm09m";
   };
 
   buildInputs = [ pkgconfig ocaml findlib camlp5 ncurses lablgtk ];
diff --git a/pkgs/applications/science/logic/stp/default.nix b/pkgs/applications/science/logic/stp/default.nix
index 109d9fe3d4be..cfe96bc6983a 100644
--- a/pkgs/applications/science/logic/stp/default.nix
+++ b/pkgs/applications/science/logic/stp/default.nix
@@ -7,7 +7,7 @@ stdenv.mkDerivation rec {
     rev    = "3aa11620a823d617fc033d26aedae91853d18635";
     sha256 = "832520787f57f63cf47364d080f30ad10d6d6e00f166790c19b125be3d6dd45c";
   };
-  buildInputs = [ cmake boost boost.lib bison flex perl zlib ];
+  buildInputs = [ cmake boost bison flex perl zlib ];
   cmakeFlags = [ "-DBUILD_SHARED_LIBS=ON" ];
   patchPhase = ''
       sed -e 's,^export(PACKAGE.*,,' -i CMakeLists.txt
diff --git a/pkgs/applications/science/math/sage/default.nix b/pkgs/applications/science/math/sage/default.nix
index ced8b6f95bb6..a27a93dd2c64 100644
--- a/pkgs/applications/science/math/sage/default.nix
+++ b/pkgs/applications/science/math/sage/default.nix
@@ -6,7 +6,7 @@ stdenv.mkDerivation rec {
   name = "sage-6.1.1";
 
   src = fetchurl {
-    url = "http://mirrors.xmission.com/sage/src/sage-6.1.1.tar.gz";
+    url = "mirror://sagemath/${name}.tar.gz";
     sha256 = "0kbzs0l9q7y34jv3f8rd1c2mrjsjkdgaw6mfdwjlpg9g4gghmq5y";
   };
 
@@ -23,9 +23,8 @@ stdenv.mkDerivation rec {
   '';
 
   meta = {
-    homepage = http://www.scilab.org/;
-    description = "Scientific software package for numerical computations (Matlab lookalike)";
-    # see http://www.scilab.org/legal
-    license = "SciLab";
+    homepage = "http://www.sagemath.org";
+    description = "A free open source mathematics software system";
+    license = stdenv.lib.licenses.gpl2Plus;
   };
 }