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author | Ben Darwin <bcdarwin@gmail.com> | 2018-04-27 18:52:46 -0400 |
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committer | Ben Darwin <bcdarwin@gmail.com> | 2018-04-27 18:57:17 -0400 |
commit | fa850e8fda68c92984760f9ff9086e8cde6ef835 (patch) | |
tree | b463e75ec9a49e3488aad4ed60f5467286b4dbf9 /pkgs/applications/science/biology | |
parent | 7b75efa231e6e68c8e08d3f3eebff8ab30986ede (diff) | |
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conglomerate: init at 2017-09-10
Diffstat (limited to 'pkgs/applications/science/biology')
-rw-r--r-- | pkgs/applications/science/biology/conglomerate/default.nix | 34 |
1 files changed, 34 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/conglomerate/default.nix b/pkgs/applications/science/biology/conglomerate/default.nix new file mode 100644 index 000000000000..c04bc84c156d --- /dev/null +++ b/pkgs/applications/science/biology/conglomerate/default.nix @@ -0,0 +1,34 @@ +{ stdenv, fetchFromGitHub, cmake, coreutils, perl, bicpl, libminc, zlib, minc_tools, + makeWrapper, GetoptTabular, MNI-Perllib }: + +stdenv.mkDerivation rec { + pname = "conglomerate"; + name = "${pname}-2017-09-10"; + + src = fetchFromGitHub { + owner = "BIC-MNI"; + repo = pname; + rev = "7343238bc6215942c7ecc885a224f24433a291b0"; + sha256 = "1mlqgmy3jc13bv7d01rjwldxq0p4ayqic85xcl222hhifi3w2prr"; + }; + + nativeBuildInputs = [ cmake makeWrapper ]; + buildInputs = [ libminc zlib bicpl ]; + propagatedBuildInputs = [ coreutils minc_tools perl GetoptTabular MNI-Perllib ]; + + cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/" "-DBICPL_DIR=${bicpl}/lib/" ]; + + postFixup = '' + for p in $out/bin/*; do + wrapProgram $p --prefix PERL5LIB : $PERL5LIB --set PATH "${stdenv.lib.makeBinPath [ coreutils minc_tools ]}"; + done + ''; + + meta = with stdenv.lib; { + homepage = https://github.com/BIC-MNI/conglomerate; + description = "More command-line utilities for working with MINC files"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.unix; + license = licenses.free; + }; +} |