minimap2: init at 2.10

1 files changed, 31 insertions, 0 deletions

diff --git a/pkgs/applications/science/biology/minimap2/default.nix b/pkgs/applications/science/biology/minimap2/default.nix
new file mode 100644
index 000000000000..ae278f76792b
--- /dev/null
+++ b/pkgs/applications/science/biology/minimap2/default.nix
@@ -0,0 +1,31 @@
+{ stdenv, fetchFromGitHub, zlib }:
+
+stdenv.mkDerivation rec {
+  name = "${pname}-${version}";
+  pname = "minimap2";
+  version = "2.10";
+
+  src = fetchFromGitHub {
+    repo = pname;
+    owner = "lh3";
+    rev = "v${version}";
+    sha256 = "0b35w14j9h2q9qbh3sxc518mcx0ifsvwqr1nv70rv6mgy1cqqkw0";
+  };
+
+  buildInputs = [ zlib ];
+
+  installPhase = ''
+    mkdir -p $out/bin
+    cp minimap2 $out/bin
+    mkdir -p $out/share/man/man1
+    cp minimap2.1 $out/share/man/man1
+  '';
+  
+  meta = with stdenv.lib; {
+    description = "A versatile pairwise aligner for genomic and spliced nucleotide sequences";
+    homepage = https://lh3.github.io/minimap2;
+    license = licenses.mit;
+    platforms = platforms.all;
+    maintainers = [ maintainers.arcadio ];
+  };
+}