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authorAlyssa Ross <hi@alyssa.is>2023-06-16 06:56:35 +0000
committerAlyssa Ross <hi@alyssa.is>2023-06-16 06:56:35 +0000
commit99fcaeccb89621dd492203ce1f2d551c06f228ed (patch)
tree41cb730ae07383004789779b0f6e11cb3f4642a3 /nixpkgs/pkgs/development/python-modules/umap-learn
parent59c5f5ac8682acc13bb22bc29c7cf02f7d75f01f (diff)
parent75a5ebf473cd60148ba9aec0d219f72e5cf52519 (diff)
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Merge branch 'nixos-unstable' of https://github.com/NixOS/nixpkgs
Conflicts:
	nixpkgs/nixos/modules/config/console.nix
	nixpkgs/nixos/modules/services/mail/mailman.nix
	nixpkgs/nixos/modules/services/mail/public-inbox.nix
	nixpkgs/nixos/modules/services/mail/rss2email.nix
	nixpkgs/nixos/modules/services/networking/ssh/sshd.nix
	nixpkgs/pkgs/applications/networking/instant-messengers/dino/default.nix
	nixpkgs/pkgs/applications/networking/irc/weechat/default.nix
	nixpkgs/pkgs/applications/window-managers/sway/default.nix
	nixpkgs/pkgs/build-support/go/module.nix
	nixpkgs/pkgs/build-support/rust/build-rust-package/default.nix
	nixpkgs/pkgs/development/interpreters/python/default.nix
	nixpkgs/pkgs/development/node-packages/overrides.nix
	nixpkgs/pkgs/development/tools/b4/default.nix
	nixpkgs/pkgs/servers/dict/dictd-db.nix
	nixpkgs/pkgs/servers/mail/public-inbox/default.nix
	nixpkgs/pkgs/tools/security/pinentry/default.nix
	nixpkgs/pkgs/tools/text/unoconv/default.nix
	nixpkgs/pkgs/top-level/all-packages.nix
Diffstat (limited to 'nixpkgs/pkgs/development/python-modules/umap-learn')
-rw-r--r--nixpkgs/pkgs/development/python-modules/umap-learn/default.nix34
1 files changed, 33 insertions, 1 deletions
diff --git a/nixpkgs/pkgs/development/python-modules/umap-learn/default.nix b/nixpkgs/pkgs/development/python-modules/umap-learn/default.nix
index 25016f9b4cc5..7097ee33a1a9 100644
--- a/nixpkgs/pkgs/development/python-modules/umap-learn/default.nix
+++ b/nixpkgs/pkgs/development/python-modules/umap-learn/default.nix
@@ -1,6 +1,7 @@
 { lib
 , buildPythonPackage
 , fetchFromGitHub
+, fetchpatch
 , keras
 , numba
 , numpy
@@ -27,6 +28,37 @@ buildPythonPackage rec {
     hash = "sha256-S2+k7Ec4AxsN6d0GUGnU81oLnBgmlZp8OmUFCNaUJYw=";
   };
 
+  patches = [
+    # Fix tests with sklearn>=1.2.0
+    (fetchpatch {
+      url = "https://github.com/lmcinnes/umap/commit/a714b59bd9e2ca2e63312bc3491b2b037a42f2f2.patch";
+      hash = "sha256-WOSWNN5ewVTV7IEBEA7ZzgZYMZxctF1jAWs9ylKTyLs=";
+    })
+    (fetchpatch {
+      url = "https://github.com/lmcinnes/umap/commit/c7d05683325589ad432a55e109cacb9d631cfaa9.patch";
+      hash = "sha256-hE2Svxf7Uja+DbCmTDCnd7mZynjNbC5GUjfqg4ZRO9Y=";
+    })
+    (fetchpatch {
+      url = "https://github.com/lmcinnes/umap/commit/949abd082524fce8c45dfb147bcd8e8ef49eade3.patch";
+      hash = "sha256-8/1k8iYeF77FIaUApNtY07auPJkrt3vNRR/HTYRvq+0=";
+    })
+    # Fix tests with numpy>=1.24
+    # https://github.com/lmcinnes/umap/pull/952
+    (fetchpatch {
+      url = "https://github.com/lmcinnes/umap/commit/588e1f724c9f5de528eb1500b0c85a1a609fe947.patch";
+      hash = "sha256-B50eyMs3CRuzOAq+jxz56XMJPdiUofUxCL0Vqolaafo=";
+    })
+    # https://github.com/lmcinnes/umap/pull/1010
+    (fetchpatch {
+      url = "https://github.com/lmcinnes/umap/commit/848396c762c894e666aaf3d0bcfe1e041b529ea6.patch";
+      hash = "sha256-ir0Pxfr2c0oSuFGXQqHjkj7nzvlpTXCYbaI9qAiLun0=";
+    })
+    (fetchpatch {
+      url = "https://github.com/lmcinnes/umap/commit/30e39938f4627f327223245dfe2c908af6b7e304.patch";
+      hash = "sha256-7Divrym05wIPa7evgrNYXGm44/EOWG8sIYV8fmtuzJ4=";
+    })
+  ];
+
   propagatedBuildInputs = [
     numba
     numpy
@@ -36,7 +68,7 @@ buildPythonPackage rec {
     tqdm
   ];
 
-  checkInputs = [
+  nativeCheckInputs = [
     keras
     pytestCheckHook
     tensorflow